https://github.com/bioconductor-source/variantannotation
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic links in README
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Unable to calculate vocabulary similarity
Last synced: 6 months ago
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JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- Language: R
- Default Branch: devel
- Size: 3.61 MB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Created over 1 year ago
· Last pushed over 1 year ago
Metadata Files
Changelog
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
Total
- Issue comment event: 1
- Pull request event: 2
- Fork event: 1
Last Year
- Issue comment event: 1
- Pull request event: 2
- Fork event: 1
Dependencies
DESCRIPTION
cran
- BiocGenerics >= 0.37.0 depends
- GenomeInfoDb >= 1.15.2 depends
- GenomicRanges >= 1.41.5 depends
- MatrixGenerics * depends
- R >= 4.0.0 depends
- Rsamtools >= 2.19.1 depends
- SummarizedExperiment >= 1.19.5 depends
- methods * depends
- AnnotationDbi >= 1.27.9 imports
- BSgenome >= 1.47.3 imports
- Biobase * imports
- Biostrings >= 2.57.2 imports
- DBI * imports
- GenomicFeatures >= 1.31.3 imports
- IRanges >= 2.23.9 imports
- S4Vectors >= 0.27.12 imports
- XVector >= 0.29.2 imports
- rtracklayer >= 1.39.7 imports
- utils * imports
- zlibbioc * imports
- AnnotationHub * suggests
- BSgenome.Hsapiens.UCSC.hg19 * suggests
- BiocStyle * suggests
- PolyPhen.Hsapiens.dbSNP131 * suggests
- RUnit * suggests
- SIFT.Hsapiens.dbSNP132 * suggests
- SIFT.Hsapiens.dbSNP137 * suggests
- SNPlocs.Hsapiens.dbSNP144.GRCh37 * suggests
- TxDb.Hsapiens.UCSC.hg19.knownGene * suggests
- ggplot2 * suggests
- httr * suggests
- jsonlite * suggests
- knitr * suggests
- magick * suggests
- rjsoncons * suggests
- snpStats * suggests