https://github.com/bioconductor-source/treesummarizedexperiment

https://github.com/bioconductor-source/treesummarizedexperiment

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (3.0%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: bioconductor-source
  • Language: R
  • Default Branch: devel
  • Size: 922 KB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 1 year ago · Last pushed over 1 year ago
Metadata Files
Readme

README.md

TreeSummarizedExperiment

codecov R-CMD-check

Installation

BiocManager::install("TreeSummarizedExperiment")

The structure

TreeSummarizedExperiment in F1000article

Owner

  • Name: (WIP DEV) Bioconductor Packages
  • Login: bioconductor-source
  • Kind: organization
  • Email: maintainer@bioconductor.org

Source code for packages accepted into Bioconductor

GitHub Events

Total
Last Year

Dependencies

.github/workflows/Codecov.yml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • r-lib/actions/setup-pandoc v1 composite
  • r-lib/actions/setup-r v1 composite
.github/workflows/R-CMD-check.yml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • actions/upload-artifact main composite
  • r-lib/actions/setup-pandoc v1 composite
  • r-lib/actions/setup-r v1 composite
DESCRIPTION cran
  • Biostrings * depends
  • R >= 3.6.0 depends
  • S4Vectors >= 0.23.18 depends
  • SingleCellExperiment * depends
  • BiocGenerics * imports
  • BiocParallel * imports
  • IRanges * imports
  • SummarizedExperiment * imports
  • ape * imports
  • dplyr * imports
  • methods * imports
  • rlang * imports
  • treeio * imports
  • utils * imports
  • BiocStyle * suggests
  • ggplot2 * suggests
  • ggtree * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests