https://github.com/bioconductor-source/topconfects
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.9%) to scientific vocabulary
Last synced: 10 months ago
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JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- License: lgpl-2.1
- Language: R
- Default Branch: devel
- Size: 576 KB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Created almost 2 years ago
· Last pushed almost 2 years ago
Metadata Files
Readme
Changelog
License
README.md
Topconfects
TOP results by CONfident efFECT Size. Topconfects is intended for RNA-seq or microarray Differntial Expression analysis and similar, where we are interested in placing confidence bounds on many effect sizes--one per gene--from few samples.
Topconfects is now in Bioconductor. The github repository is for bleeding-edge development only.
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
Total
Last Year
Dependencies
DESCRIPTION
cran
- R >= 3.6.0 depends
- assertthat * imports
- ggplot2 * imports
- methods * imports
- stats * imports
- utils * imports
- AnnotationDbi * suggests
- BiocStyle * suggests
- DESeq2 * suggests
- NBPSeq * suggests
- ashr * suggests
- dplyr * suggests
- edgeR * suggests
- knitr * suggests
- limma * suggests
- org.At.tair.db * suggests
- readr * suggests
- reshape2 * suggests
- rmarkdown * suggests
- statmod * suggests
- testthat * suggests
- tidyr * suggests