https://github.com/bioconductor-source/tnbc.cms
Science Score: 13.0%
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○Academic publication links
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○Scientific vocabulary similarity
Low similarity (3.4%) to scientific vocabulary
Last synced: 6 months ago
·
JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- License: gpl-3.0
- Language: R
- Default Branch: devel
- Size: 126 MB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Created over 1 year ago
· Last pushed over 1 year ago
Metadata Files
Readme
Changelog
License
README.md
TNBC.CMS
Overview
This package implements a machine learning-based classifier for the assignment of consensus molecular subtypes to TNBC samples. It also provides functions to summarize genomic and clinical characteristics.
Author: Doyeong Yu, Jihyun Kim, In Hae Park, Charny Park
Installation
r
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TNBC.CMS", version = "3.9")
Documentation
r
browseVignettes("TNBC.CMS")
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
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Last Year
Dependencies
DESCRIPTION
cran
- R >= 3.6.0 depends
- SummarizedExperiment * depends
- e1071 * depends
- quadprog * depends
- GGally * imports
- GSVA >= 1.26.0 imports
- R.utils * imports
- RColorBrewer * imports
- forestplot * imports
- ggplot2 * imports
- ggpubr * imports
- grDevices * imports
- grid * imports
- methods * imports
- pheatmap * imports
- pracma * imports
- stats * imports
- survival * imports
- knitr * suggests