https://github.com/bioconductor-source/tissuetreg
Science Score: 13.0%
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Scientific vocabulary similarity
Low similarity (3.2%) to scientific vocabulary
Last synced: 10 months ago
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JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- Language: R
- Default Branch: devel
- Size: 43.9 KB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Created almost 2 years ago
· Last pushed almost 2 years ago
Metadata Files
Readme
Changelog
README.md
tissue T regulatory cells and T conventional cells
Usage
This is a data package currently included in the developement version of Bioconductor.
For installation instruction please check:
https://bioconductor.org/packages/devel/data/experiment/html/tissueTreg.html
DNA methylation
- Fat Treg (3 replicates)
- Liver Treg (3 replicates)
- Lymph Treg (3 replicates)
- Skin Treg (3 replicates)
- Lymph Tconv (3 replicates)
RNA-seq
- Fat Treg (3 replicates)
- Liver Treg (3 replicates)
- Lymph Treg (3 replicates)
- Skin Treg (3 replicates)
- Lymph Tconv (3 replicates)
CITATION
When using this resource please cite:
Delacher, M, Imbusch, CD, Weichenhan, D, Breiling, A, Hotz-Wagenblatt, A, Träger, U, Hofer, AC, Kägebein, D, Wang, Q, Frauhammer, F, Mallm, JP, Bauer, K, Herrmann, C, Lang, PA, Brors, B, Plass, C, Feuerer, M (2017). Genome-wide DNA-methylation landscape defines specialization of regulatory T cells in tissues. Nat. Immunol., 18, 10:1160-1172.
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
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Last Year
Dependencies
DESCRIPTION
cran
- R >= 3.5 depends
- BiocStyle * suggests
- ExperimentHub * suggests
- SummarizedExperiment * suggests
- bsseq * suggests
- ggplot2 * suggests
- knitr * suggests
- reshape2 * suggests
- rmarkdown * suggests
- testthat * suggests