https://github.com/bioconductor-source/target
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Scientific vocabulary similarity
Low similarity (7.2%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- License: gpl-3.0
- Language: R
- Default Branch: devel
- Size: 4.58 MB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
target
Predict Combined Function of Transcription Factors
Implement the BETA algorithm for infering direct target genes from DNA-binding and perturbation expression data Wang et al. (2013). Extend the algorithm to predict the combined function of two DNA-binding elements from comprable binding and expression data.
Installation
The target package can be installed from Bioconductor using BiocManager.
{r install_biocmanager,eval=FALSE}
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("target")
Citation
For citing the package use:
```{r citation, warning=FALSE}
citing the package
citation("target")
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
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Dependencies
- R >= 3.6 depends
- BiocGenerics * imports
- GenomicRanges * imports
- IRanges * imports
- graphics * imports
- matrixStats * imports
- methods * imports
- shiny * imports
- stats * imports
- covr * suggests
- knitr * suggests
- rmarkdown * suggests
- shinyBS * suggests
- shinytest * suggests
- testthat >= 2.1.0 suggests