https://github.com/bioconductor-source/seqsetvis
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.7%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- License: other
- Language: R
- Default Branch: devel
- Size: 60.7 MB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
See the vignette for an overview of most common functions and usage examples.
Installation
From Bioconductor
```{r bioc install, eval=FALSE}
try http:// if https:// URLs are not supported
if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("seqsetvis") ```
From github
One dependency from bioconductor isn't getting installed automatically
{r bioC missed dependency, eval=FALSE}
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("GenomeInfoDbData")
Install devtools if needed
{r devtools check, eval=FALSE}
if(!require(devtools)){
install.packages("devtools")
}
Install seqsetvis from github
{r install seqsetvis from github, eval=FALSE}
devtools::install_github("jrboyd/seqsetvis")
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
Total
Last Year
Dependencies
- R >= 4.3 depends
- ggplot2 * depends
- GenomeInfoDb * imports
- GenomicAlignments * imports
- GenomicRanges * imports
- IRanges * imports
- RColorBrewer * imports
- Rsamtools * imports
- S4Vectors * imports
- UpSetR * imports
- cowplot * imports
- data.table * imports
- eulerr * imports
- ggplotify * imports
- grDevices * imports
- grid * imports
- limma * imports
- methods * imports
- pbapply * imports
- pbmcapply * imports
- png * imports
- rtracklayer * imports
- scales * imports
- stats * imports
- BiocFileCache * suggests
- BiocManager * suggests
- BiocStyle * suggests
- ChIPpeakAnno * suggests
- covr * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests