https://github.com/bioconductor-source/rqc
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.8%) to scientific vocabulary
Last synced: 10 months ago
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JSON representation
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- Language: R
- Default Branch: devel
- Size: 436 KB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Created almost 2 years ago
· Last pushed almost 2 years ago
Metadata Files
Readme
Changelog
README.md
Rqc
Rqc is an optimized tool designed for quality control and assessment of high-throughput sequencing data. It performs parallel processing of entire files and produces a report which contains a set of high-resolution graphics.
Installation
Install via Bioconductor, stable version
r
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("Rqc")
Install via GitHub, development vertion
r
install.packages("devtools")
library(devtools)
install_github("labbcb/Rqc")
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
Total
Last Year
Dependencies
DESCRIPTION
cran
- BiocParallel * depends
- ShortRead * depends
- ggplot2 * depends
- BiocGenerics >= 0.25.1 imports
- BiocStyle * imports
- Biostrings * imports
- GenomicAlignments * imports
- GenomicFiles * imports
- IRanges * imports
- Rcpp >= 0.11.6 imports
- Rsamtools * imports
- S4Vectors * imports
- biovizBase * imports
- grid * imports
- knitr >= 1.7 imports
- markdown * imports
- methods * imports
- plyr * imports
- reshape2 * imports
- shiny * imports
- rmarkdown * suggests
- testthat * suggests