https://github.com/bioconductor-source/rnaagecalc
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.6%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: bioconductor-source
- Language: R
- Default Branch: devel
- Size: 5.5 MB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
RNAAgeCalc
RNAAgeCalc is a multi-tissue transcriptionals age calculator.
The RNAAgeCalc paper can be found here.
The Bioconductor package can be found here.
The Bioconductor package vignette can be found here.
An interactive Shiny App can be found here.
The Shiny App demo can be found here.
The Python version of RNAAgeCalc can be found here.
Package installation
{r}
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager")
BiocManager::install("RNAAgeCalc")
Citation
Ren, X., & Kuan, P. F. (2020). RNAAgeCalc: A multi-tissue transcriptional age calculator. PloS one, 15(8), e0237006.
@article{ren2020rnaagecalc,
title={RNAAgeCalc: A multi-tissue transcriptional age calculator},
author={Ren, Xu and Kuan, Pei-Fen},
journal={PLOS ONE},
volume={15},
number={8},
pages={1-21},
year={2020},
publisher={Public Library of Science}
}
Owner
- Name: (WIP DEV) Bioconductor Packages
- Login: bioconductor-source
- Kind: organization
- Email: maintainer@bioconductor.org
- Website: https://bioconductor.org
- Repositories: 1
- Profile: https://github.com/bioconductor-source
Source code for packages accepted into Bioconductor
GitHub Events
Total
Last Year
Dependencies
- R >= 3.6 depends
- AnnotationDbi * imports
- SummarizedExperiment * imports
- ggplot2 * imports
- impute * imports
- methods * imports
- org.Hs.eg.db * imports
- recount * imports
- stats * imports
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests