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Recent Releases of https://github.com/biocore/birdman

https://github.com/biocore/birdman - v0.2.0

Major updates to fitting & documentation.

- Python
Published by gibsramen over 2 years ago

https://github.com/biocore/birdman - v0.1.0

What's Changed

  • Update docs with correct alrtoclr params by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/64
  • Update GH actions by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/68
  • updated documentation on installation by @yangchen2 in https://github.com/gibsramen/BIRDMAn/pull/67
  • Add chunking support to ModelIterator by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/72
  • Update default models & documentation by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/73
  • Update inference conversion function by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/74
  • Add summarize function by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/75
  • Add coords to summary docstring by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/76
  • Create parallelization.rst by @yangchen2 in https://github.com/gibsramen/BIRDMAn/pull/71
  • Add docs page on Negative Binomial model by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/77
  • Update to v0.1.0 by @gibsramen in https://github.com/gibsramen/BIRDMAn/pull/78

New Contributors

  • @yangchen2 made their first contribution in https://github.com/gibsramen/BIRDMAn/pull/67

Full Changelog: https://github.com/gibsramen/BIRDMAn/compare/v0.0.4...v0.1.0

- Python
Published by gibsramen over 3 years ago

https://github.com/biocore/birdman - v0.0.4

Refactored Model architecture to be more maintainable. Now abstract class BaseModel has two subclasses TableModel and SingleFeatureModel for full table regression and single feature regression respectively. Explicit Dask integration is removed as it was too unwieldy. A ModelIterator class is provided to make iterating over single features from a table more accessible.

- Python
Published by gibsramen over 4 years ago

https://github.com/biocore/birdman - v0.0.3

Refactor of Model API - decomposed into BaseModel and subclass RegressionModel. Large overhaul of parallelization including more options for workflows. Can now specify auto-conversion to InferenceData when fitting model.

- Python
Published by gibsramen over 4 years ago

https://github.com/biocore/birdman - Alpha Release - Minor Update

Minor updates to README and setup.py for documentation & PyPi purposes.

- Python
Published by gibsramen almost 5 years ago

https://github.com/biocore/birdman - Alpha Release

Initial release - primarily for internal testing.

- Python
Published by gibsramen almost 5 years ago