https://github.com/bioexcel/biobb_adapters
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow managers.
Science Score: 23.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
2 of 8 committers (25.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.0%) to scientific vocabulary
Keywords from Contributors
Repository
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow managers.
Basic Info
- Host: GitHub
- Owner: bioexcel
- License: apache-2.0
- Language: Common Workflow Language
- Default Branch: master
- Homepage: https://mmb.irbbarcelona.org/biobb/
- Size: 177 MB
Statistics
- Stars: 1
- Watchers: 7
- Forks: 5
- Open Issues: 4
- Releases: 0
Metadata Files
README.md
biobb_adapters
Introduction
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow managers. Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular bioinformatics tools. <!-- The latest documentation of this package can be found in our readthedocs site: latest API documentation. -->
Version
5.1.1 2025.1
Copyright & Licensing
This software has been developed in the MMB group at the BSC & IRB for the European BioExcel, funded by the European Commission (EU Horizon Europe 101093290, EU H2020 823830, EU H2020 675728).
- (c) 2015-2025 Barcelona Supercomputing Center
- (c) 2015-2025 Institute for Research in Biomedicine
Licensed under the Apache License 2.0, see the file LICENSE for details.
Owner
- Name: BioExcel
- Login: bioexcel
- Kind: organization
- Website: https://bioexcel.eu/
- Repositories: 50
- Profile: https://github.com/bioexcel
Center of Excellence for Computational Biomolecular Research
GitHub Events
Total
- Push event: 11
Last Year
- Push event: 11
Committers
Last synced: over 3 years ago
All Time
- Total Commits: 158
- Total Committers: 8
- Avg Commits per committer: 19.75
- Development Distribution Score (DDS): 0.563
Top Committers
| Name | Commits | |
|---|---|---|
| Josep Ll. Gelpi | g****i@u****u | 69 |
| Pau Andrio | a****u@g****m | 62 |
| gbayarri | g****i@i****g | 16 |
| Jorge Ejarque | j****e@b****s | 5 |
| Robin Long | r****1@h****k | 3 |
| Stian Soiland-Reyes | s****s@m****k | 1 |
| Adam Hospital Gasch | a****l@i****g | 1 |
| Stian Soiland-Reyes | s****n@a****g | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 12 months ago
All Time
- Total issues: 4
- Total pull requests: 3
- Average time to close issues: N/A
- Average time to close pull requests: about 6 hours
- Total issue authors: 3
- Total pull request authors: 3
- Average comments per issue: 0.0
- Average comments per pull request: 0.0
- Merged pull requests: 3
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- PauAndrio (2)
- douglowe (1)
- adamhospital (1)
Pull Request Authors
- jfennick (1)
- PauAndrio (1)
- longr (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 121 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 12
- Total maintainers: 3
pypi.org: biobb-adapters
Biobb_adapters is the Biobb module collection to use the building blocks with several workflow managers.
- Homepage: https://github.com/bioexcel/biobb_adapters
- Documentation: http://biobb_adapters.readthedocs.io/en/latest/
- License: Apache Software License
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Latest release: 5.1.1
published 12 months ago
Rankings
Dependencies
- cwltool *