https://github.com/biojulia/popgen.jl

Population Genetics in Julia

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
✓
.zenodo.json file
Found .zenodo.json file
✓
DOI references
Found 3 DOI reference(s) in README
✓
Academic publication links
Links to: zenodo.org
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Committers with academic emails
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (6.2%) to scientific vocabulary

Keywords

fst genetics genomics microsatellites popgen snps structure

Keywords from Contributors

pde pinn control finite-volume neural-sde surrogate numeric exoplanets hybrid-differential-equations symbolic-computation

Last synced: 5 months ago · JSON representation

Repository

Population Genetics in Julia

Basic Info

Host: GitHub
Owner: BioJulia
License: mit
Language: Julia
Default Branch: dev
Homepage: https://biojulia.github.io/PopGen.jl/
Size: 76.1 MB

Statistics

Stars: 52
Watchers: 6
Forks: 16
Open Issues: 5
Releases: 23

Topics

fst genetics genomics microsatellites popgen snps structure

Created over 6 years ago · Last pushed about 1 year ago

Metadata Files

Readme Contributing License Code of conduct

README.md

Population Genetics in Julia.

How to install:

Invoke the package manager by pressing ] on an empty line and add PopGen

install_instructions

Cite As

Pavel V. Dimens, & Jason Selwyn. (2022). BioJulia/PopGen.jl: v0.8.0 (v0.8.0). Zenodo. https://doi.org/10.5281/zenodo.6450254

Authors

Pavel Dimens

Jason Selwyn

Owner

Name: BioJulia
Login: BioJulia
Kind: organization

Website: https://biojulia.dev
Repositories: 79
Profile: https://github.com/BioJulia

Bioinformatics and Computational Biology in Julia

GitHub Events

Total

Create event: 1
Commit comment event: 2
Release event: 1
Issues event: 2
Watch event: 6
Delete event: 1
Push event: 5
Pull request event: 1

Last Year

Create event: 1
Commit comment event: 2
Release event: 1
Issues event: 2
Watch event: 6
Delete event: 1
Push event: 5
Pull request event: 1

Committers

Last synced: 8 months ago

All Time

Total Commits: 1,131
Total Committers: 7
Avg Commits per committer: 161.571
Development Distribution Score (DDS): 0.139

Past Year

Commits: 7
Committers: 1
Avg Commits per committer: 7.0
Development Distribution Score (DDS): 0.0

Top Committers

Name	Email	Commits
Pavel Dimens	p**s@l**m	974
jdselwyn	j**n@g**m	121
github-actions[bot]	4****]	20
CompatHelper Julia	c**y@j**g	12
Ben J. Ward	a**0@g**m	2
$(ci_cfg.username)	$****)	1
Kevin Bonham	k**n@b**h	1

Committer Domains (Top 20 + Academic)

bonham.ch: 1 julialang.org: 1

Issues and Pull Requests

Last synced: 8 months ago

All Time

Total issues: 26
Total pull requests: 79
Average time to close issues: 24 days
Average time to close pull requests: 15 days
Total issue authors: 5
Total pull request authors: 4
Average comments per issue: 1.92
Average comments per pull request: 0.04
Merged pull requests: 52
Bot issues: 0
Bot pull requests: 58

Past Year

Issues: 1
Pull requests: 0
Average time to close issues: about 13 hours
Average time to close pull requests: N/A
Issue authors: 1
Pull request authors: 0
Average comments per issue: 1.0
Average comments per pull request: 0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

View more stats

Top Authors

Issue Authors

pdimens (22)
hannesbecher (1)
jakobnissen (1)
JuliaTagBot (1)
dgleich (1)

Pull Request Authors

github-actions[bot] (58)
pdimens (19)
kescobo (1)
quinnj (1)

Top Labels

Issue Labels

enhancement (16) bug (5) breaking (1)

Pull Request Labels

Packages

Total packages: 1
Total downloads:
- julia 2 total

Total dependent packages: 1
Total dependent repositories: 0
Total versions: 24

juliahub.com: PopGen

Population Genetics in Julia

Homepage: https://biojulia.github.io/PopGen.jl/
Documentation: https://docs.juliahub.com/General/PopGen/stable/
License: MIT
Latest release: 0.9.5
published over 1 year ago

Versions: 24
Dependent Packages: 1
Dependent Repositories: 0
Downloads: 2 Total

Rankings

Forks count: 9.8%

Dependent repos count: 9.9%

Average: 14.6%

Stargazers count: 15.7%

Dependent packages count: 23.0%

Last synced: 6 months ago

Dependencies

.github/workflows/TagBot.yml actions

JuliaRegistries/TagBot v1 composite

.github/workflows/pkgtests.yaml actions

actions/cache v1 composite
actions/checkout v2 composite
julia-actions/julia-buildpkg latest composite
julia-actions/julia-runtest latest composite
julia-actions/setup-julia v1 composite

.github/workflows/upstream.yml actions

actions/cache v1 composite
actions/checkout v2 composite
julia-actions/julia-buildpkg latest composite
julia-actions/setup-julia v1 composite