https://github.com/biojulia/bio.jl
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
3 of 27 committers (11.1%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.1%) to scientific vocabulary
Keywords
bioinformatics
biojulia
biojulia-packages
biology
deprecated
dna
genomics
Keywords from Contributors
julialang
numerical
programming-language
dataframes
tabular-data
data-frame
ecology
julia-package
intervals
pdb
Last synced: 5 months ago
·
JSON representation
Repository
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
Basic Info
- Host: GitHub
- Owner: BioJulia
- License: mit
- Language: Julia
- Default Branch: master
- Homepage: http://biojulia.dev
- Size: 6.7 MB
Statistics
- Stars: 266
- Watchers: 42
- Forks: 63
- Open Issues: 0
- Releases: 9
Archived
Topics
bioinformatics
biojulia
biojulia-packages
biology
deprecated
dna
genomics
Created about 12 years ago
· Last pushed over 2 years ago
Metadata Files
Readme
License
Codeowners
README.md
Bio
This package has been depreceated. Full details are available here. You might still download and use this package, as we don't want old scripts to break. However going forward, know that this repository is archived and read only, no further updates or fixes will be committed. You should use the packages that replace Bio.jl - a list is available here.
Owner
- Name: BioJulia
- Login: BioJulia
- Kind: organization
- Website: https://biojulia.dev
- Repositories: 79
- Profile: https://github.com/BioJulia
Bioinformatics and Computational Biology in Julia
GitHub Events
Total
- Watch event: 7
- Fork event: 1
Last Year
- Watch event: 7
- Fork event: 1
Committers
Last synced: 8 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Kenta Sato | b****5@g****m | 323 |
| Daniel Jones | d****s@c****u | 192 |
| Ben J. Ward | a****0@g****m | 114 |
| Ben J. Ward | w****0@g****m | 42 |
| Joe Greener | j****r@h****k | 35 |
| brk00 | p****o@g****m | 26 |
| Kevin Murray | s****m@k****u | 22 |
| Ben J. Ward | b****d@p****m | 13 |
| Kevin Bonham, PhD | k****m@g****m | 13 |
| Paulo R. O. Castro | b****0@f****r | 11 |
| Kevin Murray | k****1 | 10 |
| Richard Smith | r****4@g****m | 10 |
| Richard Smith-Unna | r****5@c****k | 5 |
| Julian Gehring | j****g@g****m | 3 |
| wildgarden | a****n@s****e | 3 |
| Michael Hatherly | m****y@g****m | 2 |
| Diego Javier Zea | d****a@g****m | 1 |
| Joel S | j****r@g****m | 1 |
| Kemal Eren | k****l@k****m | 1 |
| Kevin Squire | k****e@g****m | 1 |
| Manabu ISHII | m****b@g****m | 1 |
| Marcio Giaxa Marinheiro | m****a@g****m | 1 |
| Nicolas Palopoli | n****o@g****m | 1 |
| Tony Kelman | t****y@k****t | 1 |
| Eric Davies | i****2@g****m | 1 |
| Elliot Saba | s****t@g****m | 1 |
| The ultimate Renan | u****n@g****m | 1 |
Committer Domains (Top 20 + Academic)
kelman.net: 1
kemaleren.com: 1
students.uni-mainz.de: 1
cam.ac.uk: 1
fake.server: 1
kdmurray.id.au: 1
hotmail.co.uk: 1
cs.washington.edu: 1
Issues and Pull Requests
Last synced: 8 months ago
All Time
- Total issues: 66
- Total pull requests: 34
- Average time to close issues: over 2 years
- Average time to close pull requests: 4 months
- Total issue authors: 30
- Total pull request authors: 10
- Average comments per issue: 6.79
- Average comments per pull request: 4.91
- Merged pull requests: 25
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- bicycle1885 (14)
- SabrinaJaye (10)
- blahah (5)
- diegozea (3)
- phaverty (3)
- bdeonovic (2)
- dcjones (2)
- sbromberger (2)
- ManaseeTW (2)
- CorySimon (2)
- ccsv (2)
- weinstockj (1)
- abhijithch (1)
- prcastro (1)
- JokingHero (1)
Pull Request Authors
- SabrinaJaye (14)
- bicycle1885 (10)
- jgreener64 (3)
- h3nnn4n (1)
- monkeywithacupcake (1)
- staticfloat (1)
- joelselvaraj (1)
- dcjones (1)
- iamed2 (1)
- timbitz (1)
Top Labels
Issue Labels
enhancement (12)
stage: planning (5)
priority: soon (3)
question (3)
assistance appreciated (2)
stage: WIP (2)
comments appreciated (2)
living issue (1)
wontfix (1)
temporarily resolved (1)
performance (1)
Pull Request Labels
stage: WIP (4)
comments appreciated (2)
enhancement (2)
stage: planning (1)
assistance appreciated (1)
priority: soon (1)
performance (1)
stage: review (1)
priority: urgent (1)
Packages
- Total packages: 1
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Total downloads:
- julia 1 total
- Total dependent packages: 0
- Total dependent repositories: 8
- Total versions: 2
juliahub.com: Bio
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
- Homepage: http://biojulia.dev
- Documentation: https://docs.juliahub.com/General/Bio/stable/
- License: MIT
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Latest release: 1.0.1
published over 3 years ago
Rankings
Forks count: 1.8%
Stargazers count: 3.2%
Dependent repos count: 3.6%
Average: 12.3%
Dependent packages count: 40.4%
Last synced:
6 months ago