https://github.com/biojulia/xam.jl - v0.4.2

XAM v0.4.2

Diff since v0.4.1

Merged pull requests: - Corrected next_tag_position method (#79) (@meerkat256)

- Julia
Published by github-actions[bot] 10 months ago

https://github.com/biojulia/xam.jl - v0.4.1

XAM v0.4.1

Diff since v0.4.0

Merged pull requests: - Corrected isproperpair method (#78) (@hanningk)

- Julia
Published by CiaranOMara 10 months ago

https://github.com/biojulia/xam.jl - v0.4.0

XAM v0.4.0

Diff since v0.3.1

Merged pull requests: - Fix deprecated find in header docs (#62) (@jonathanBieler) - Update Automa to v1 (#65) (@jakobnissen) - Release/v0.4.0 (#66) (@CiaranOMara)

Closed issues: - XAM compatibilty for Automa very old, please update? (#64)

- Julia
Published by github-actions[bot] about 2 years ago

https://github.com/biojulia/xam.jl - v0.3.1

XAM v0.3.1

Diff since v0.3.0

Merged pull requests: - Upgrade to BioAlignments v3 (#55) (@MillironX) - Release 0.3.1 (#57) (@MillironX)

- Julia
Published by CiaranOMara almost 3 years ago

https://github.com/biojulia/xam.jl - v0.3.0

XAM v0.3.0

Diff since v0.2.8

Closed issues: - BoundsError in eachoverlap() (#31)

Merged pull requests: - Release v0.3.0 (#52) (@MillironX)

- Julia
Published by github-actions[bot] over 3 years ago

https://github.com/biojulia/xam.jl - v0.2.8

XAM v0.2.8

Diff since v0.2.7

Closed issues: - TagBot trigger issue (#36) - can you add some functions to BAM.Reader? (#39) - Install ERROR: Unsatisfiable requirements detected for package BioSequences (#41) - how to use @threads to use multithreads when reading BAM file (#44)

Merged pull requests: - Improve documentation of flag function (#43) (@jakobnissen) - Upgrade BioAlignments to v2.2 & BioSequences to v3 (#48) (@MillironX)

- Julia
Published by github-actions[bot] over 3 years ago

https://github.com/biojulia/xam.jl - v0.2.7

XAM v0.2.7

Diff since v0.2.7

- Julia
Published by CiaranOMara almost 5 years ago

https://github.com/biojulia/xam.jl - v0.2.6

XAM v0.2.6

Diff since v0.2.5

Merged pull requests: - Fixes BAM.isnextmapped() (#22) (@dialvarezs)

- Julia
Published by CiaranOMara almost 5 years ago

https://github.com/biojulia/xam.jl - v0.2.5

XAM v0.2.5

Diff since v0.2.4

- Julia
Published by CiaranOMara almost 5 years ago

https://github.com/biojulia/xam.jl - v0.2.4

XAM v0.2.4

Diff since v0.2.3

Closed issues: - Is there any way to check whether chromosome is available for a BAM file when using eachoverlap()? (#11)

Merged pull requests: - hotfix/iterate (#12) (@CiaranOMara)

- Julia
Published by github-actions[bot] over 5 years ago

https://github.com/biojulia/xam.jl - v0.2.3

XAM v0.2.3

Diff since v0.2.1

This hotfix ensures records are reset/emptied between iterations.

Closed issues: - Memory leak (#10)

- Julia
Published by github-actions[bot] almost 6 years ago

https://github.com/biojulia/xam.jl - v0.2.2

This hotfix unsuccessfully attempts to address an observed memory leak.

- Julia
Published by CiaranOMara almost 6 years ago

https://github.com/biojulia/xam.jl - v0.2.1

XAM v0.2.1

Diff since v0.2.0

This hotfix corrects the acquisition of metadata.

- Julia
Published by github-actions[bot] almost 6 years ago

https://github.com/biojulia/xam.jl - v0.2.0

XAM v0.2.0

Diff since v0.1.1

This feature release: - migrates from BufferedStreams to TranscodingStreams; and - migrates from BioCore to BioGenerics.

- Julia
Published by github-actions[bot] almost 6 years ago

https://github.com/biojulia/xam.jl - v0.1.1

XAM v0.1.1

Diff since v0.1.0

- Julia
Published by github-actions[bot] almost 6 years ago

https://github.com/biojulia/xam.jl - v0.1.0

XAM v0.1.0

The initial release of code lifted from BioAlignemnts.jl v1.0.1.

- Julia
Published by github-actions[bot] almost 6 years ago