https://github.com/biojulia/intervaltrees.jl
A data structure for efficient manipulation of sets of intervals
Science Score: 33.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
2 of 9 committers (22.2%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (17.3%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
A data structure for efficient manipulation of sets of intervals
Basic Info
- Host: GitHub
- Owner: BioJulia
- License: mit
- Language: Julia
- Default Branch: master
- Size: 571 KB
Statistics
- Stars: 48
- Watchers: 9
- Forks: 17
- Open Issues: 12
- Releases: 8
Topics
Metadata Files
README.md
IntervalTrees
Description
IntervalTrees provides the type: IntervalTree{K, V}.
It implements an associative container mapping (K, K) pairs to to values of type V.
K may be any ordered type, but only pairs (a, b) where a ≤ b can be stored.
In other words they are associative contains that map intervals to values.
Installation
You can install the IntervalTrees package from the Julia REPL.
Press ] to enter pkg mode, then enter the following command:
julia
add IntervalTrees
If you are interested in the cutting edge of the development, please check out the master branch to try new features before release.
Testing
IntervalTrees is tested against Julia 0.7-1.X on Linux, OS X, and Windows.
Latest build status:
Contributing
We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.
Financial contributions
We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development of the community, it will be "merged" in the ledger of our open collective by the core contributors and the person who filed the expense will be reimbursed.
Backers & Sponsors
Thank you to all our backers and sponsors!
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Questions?
If you have a question about contributing or using BioJulia software, come on over and chat to us on the Julia Slack workspace, or you can try the Bio category of the Julia discourse site.
Owner
- Name: BioJulia
- Login: BioJulia
- Kind: organization
- Website: https://biojulia.dev
- Repositories: 79
- Profile: https://github.com/BioJulia
Bioinformatics and Computational Biology in Julia
GitHub Events
Total
- Watch event: 3
Last Year
- Watch event: 3
Committers
Last synced: 8 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Daniel Jones | d****s@c****u | 64 |
| Ciarán O'Mara | C****a@u****u | 30 |
| Kenta Sato | b****5@g****m | 25 |
| Ben J. Ward | w****0@g****m | 10 |
| Peter M. Haverty | p****y@g****m | 3 |
| Julian Gehring | j****g@g****m | 2 |
| Richard Smith-Unna | r****4@g****m | 1 |
| Sambit Kumar Dash | s****h@g****m | 1 |
| Tony Kelman | t****y@k****t | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 8 months ago
All Time
- Total issues: 19
- Total pull requests: 42
- Average time to close issues: 5 months
- Average time to close pull requests: 4 months
- Total issue authors: 14
- Total pull request authors: 11
- Average comments per issue: 1.74
- Average comments per pull request: 2.4
- Merged pull requests: 35
- Bot issues: 0
- Bot pull requests: 1
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- sambitdash (2)
- yakir12 (2)
- dcjones (2)
- CiaranOMara (2)
- phaverty (2)
- juliangehring (1)
- Wikunia (1)
- jwscook (1)
- o314 (1)
- mschauer (1)
- SDeans0 (1)
- nw11 (1)
- JuliaTagBot (1)
- simon-anders (1)
Pull Request Authors
- bicycle1885 (16)
- dcjones (7)
- CiaranOMara (7)
- phaverty (3)
- SabrinaJaye (3)
- femtocleaner[bot] (1)
- tkelman (1)
- mortenpi (1)
- prcastro (1)
- juliangehring (1)
- sambitdash (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- julia 502 total
- Total dependent packages: 7
- Total dependent repositories: 24
- Total versions: 2
juliahub.com: IntervalTrees
A data structure for efficient manipulation of sets of intervals
- Documentation: https://docs.juliahub.com/General/IntervalTrees/stable/
- License: MIT
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Latest release: 1.1.0
published almost 3 years ago