https://github.com/biojulia/bigbed.jl
Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
○codemeta.json file
-
○.zenodo.json file
-
○DOI references
-
○Academic publication links
-
✓Committers with academic emails
1 of 1 committers (100.0%) from academic institutions -
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (18.3%) to scientific vocabulary
Keywords
Repository
Basic Info
- Host: GitHub
- Owner: BioJulia
- License: mit
- Language: Julia
- Default Branch: develop
- Size: 147 KB
Statistics
- Stars: 4
- Watchers: 11
- Forks: 2
- Open Issues: 4
- Releases: 0
Topics
Metadata Files
README.md
BigBed.jl
This project follows the semver pro forma and uses the git-flow branching model.
Description
The BigBed package provides data representation and IO tools for the bigBed file format. The bigBed binary file format is for representing genomic annotations. It is indexed to fetch specific regions quickly and is often created from BED files.
Installation
You can install the BigBed package from the Julia REPL.
Press ] to enter pkg mode, then enter the following command:
julia
add BigBed
If you are interested in the cutting edge of the development, please check out the develop branch to try new features before release.
Testing
BigBed is tested against Julia 1.X on Linux, OS X, and Windows.
Latest build status:
Contributing
We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.
Financial contributions
We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development the core contributors and the person who filed the expense will be reimbursed.
Backers & Sponsors
Thank you to all our backers and sponsors!
Love our work and community? Become a backer.
Does your company use BioJulia? Help keep BioJulia feature rich and healthy by sponsoring the project. Your logo will show up here with a link to your website.
Questions?
If you have a question about contributing or using BioJulia software, come on over and chat to us on Gitter, or you can try the Bio category of the Julia discourse site.
Owner
- Name: BioJulia
- Login: BioJulia
- Kind: organization
- Website: https://biojulia.dev
- Repositories: 79
- Profile: https://github.com/BioJulia
Bioinformatics and Computational Biology in Julia
GitHub Events
Total
Last Year
Committers
Last synced: 8 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Ciarán O'Mara | C****a@u****u | 18 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 8 months ago
All Time
- Total issues: 1
- Total pull requests: 4
- Average time to close issues: N/A
- Average time to close pull requests: 5 months
- Total issue authors: 1
- Total pull request authors: 3
- Average comments per issue: 5.0
- Average comments per pull request: 0.25
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 2
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- jonathanBieler (1)
Pull Request Authors
- github-actions[bot] (2)
- gitter-badger (1)
- jakobnissen (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
- Total downloads: unknown
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 1
juliahub.com: BigBed
- Documentation: https://docs.juliahub.com/General/BigBed/stable/
- License: MIT
-
Latest release: 0.1.0
published almost 6 years ago