https://github.com/biojulia/libz.jl
Fast, flexible zlib bindings.
Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
1 of 17 committers (5.9%) from academic institutions -
○Institutional organization owner
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○Scientific vocabulary similarity
Low similarity (12.4%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
Fast, flexible zlib bindings.
Basic Info
Statistics
- Stars: 27
- Watchers: 14
- Forks: 17
- Open Issues: 10
- Releases: 0
Topics
Metadata Files
README.md
NOTE: If you are starting a new project on Julia 0.6 or later, it is recommended to use the CodecZlib.jl package instead. CodecZlib.jl and other packages offer more unified interfaces for a wide range of file formats.
This is yet another zlib interface for Julia. It's intended to replace the two prior zlib packages.
Both have shortcomings that this package aims to address, specifically:
- Zlib.jl is very slow.
- GZip.jl is not as slow as Zlib.jl, but still slower than it could to be.
- GZip.jl only supports file I/O.
- GZip.jl doesn't support reading/writing plain zlib data.
API
This library exports four stream types:
Type | Description
------| ---------------
ZlibInflateOutputStream | write and decompress data
ZlibDeflateOutputStream | write and compress data
ZlibInflateInputStream | read and decompress data
ZlibDeflateInputStream | read and compress data
These work like regular IO objects. Each takes as a parameter either in input
or output source.
Examples
```julia
read lines from a compressed file
for line in eachline(open("data.txt.gz") |> ZlibInflateInputStream) # do something... end
write compressed data to a file
io = open("data.txt.gz", "w")
stream = ZlibDeflateOutputStream(io)
for c in rand(UInt8, 10000)
write(stream, c)
end
close(stream) # this closes not only stream but also io
pointlessly compress and decompress some data (use read on v0.5)
readbytes(rand(UInt8, 10000) |> ZlibDeflateInputStream |> ZlibInflateInputStream) ```
Other functions
There are convenience Libz.inflate(::Vector{UInt8}) and Libz.deflate(::Vector{UInt8})
functions that take a byte array and return another compressed or decompressed
byte array.
Checksum functions are exposed as Libz.crc32(::Vector{UInt8}) and
Libz.adler32(::Vector{UInt8}).
See BufferedStreams.jl for benchmarks of this library.
Low-level APIs are defined in src/lowlevel.jl. These constants and functions are not exported but available if necessary. At the moment, function wrappers are minimal but feel free to add and send functions you need as pull requests.
Owner
- Name: BioJulia
- Login: BioJulia
- Kind: organization
- Website: https://biojulia.dev
- Repositories: 79
- Profile: https://github.com/BioJulia
Bioinformatics and Computational Biology in Julia
GitHub Events
Total
Last Year
Committers
Last synced: 8 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Kenta Sato | b****5@g****m | 26 |
| Daniel Jones | d****s@c****u | 23 |
| Sam O'Connor | s****m@o****u | 6 |
| Mus M | m****m@o****m | 4 |
| Yichao Yu | y****2@g****m | 4 |
| Ben J. Ward | b****d@p****m | 3 |
| Elliot Saba | s****t@g****m | 2 |
| Andreas Noack | a****n@g****m | 2 |
| Ben J. Ward | w****0@g****m | 2 |
| Gunnar Farnebäck | g****r@l****e | 2 |
| Ben J. Ward | a****0@g****m | 1 |
| Jon Malmaud | m****d@g****m | 1 |
| Julian Gehring | j****g@g****m | 1 |
| femtocleaner[bot] | f****] | 1 |
| Tony Kelman | t****y@k****t | 1 |
| Kevin Murray | k****1 | 1 |
| femtotrader | f****r@g****m | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 27
- Total pull requests: 42
- Average time to close issues: 2 months
- Average time to close pull requests: 21 days
- Total issue authors: 23
- Total pull request authors: 15
- Average comments per issue: 3.0
- Average comments per pull request: 3.02
- Merged pull requests: 41
- Bot issues: 0
- Bot pull requests: 1
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- quinnj (3)
- sfchen (2)
- robertfeldt (2)
- tpapp (1)
- davidanthoff (1)
- jnmaloof (1)
- jakobnissen (1)
- SabrinaJaye (1)
- dcjones (1)
- tlnagy (1)
- StephenVavasis (1)
- hpoit (1)
- hayd (1)
- kdm9 (1)
- ylxdzsw (1)
Pull Request Authors
- bicycle1885 (17)
- yuyichao (4)
- musm (4)
- GunnarFarneback (2)
- andreasnoack (2)
- staticfloat (2)
- samoconnor (2)
- SabrinaJaye (2)
- Hydrotoast (1)
- malmaud (1)
- femtocleaner[bot] (1)
- kdm9 (1)
- tkelman (1)
- juliangehring (1)
- femtotrader (1)
Top Labels
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Packages
- Total packages: 1
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Total downloads:
- julia 153 total
- Total dependent packages: 7
- Total dependent repositories: 38
- Total versions: 3
juliahub.com: Libz
Fast, flexible zlib bindings.
- Documentation: https://docs.juliahub.com/General/Libz/stable/
- License: MIT
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Latest release: 1.0.1
published about 6 years ago