Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 5 DOI reference(s) in README -
✓Academic publication links
Links to: arxiv.org, springer.com, zenodo.org -
○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.0%) to scientific vocabulary
Repository
A python library for animal vocalisation analysis
Basic Info
- Host: GitHub
- Owner: nilomr
- License: mit
- Language: Python
- Default Branch: main
- Homepage: https://nilomr.github.io/pykanto
- Size: 151 MB
Statistics
- Stars: 37
- Watchers: 4
- Forks: 3
- Open Issues: 15
- Releases: 10
Metadata Files
README.md
pykanto is a python library to manage and analyse bird vocalisations
Installation • Getting started • Acknowledgements
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Installation
See installing pykanto for a complete installation guide.
To install pykanto using pip, simply run:
pip install pykanto
Getting started
See getting started for a complete use guide.
Datasets
There are three small vocalisation datasets packaged with pykanto, used
for unit tests and demonstration purposes. These will be downloaded automatically
when you install the library.
| Dataset | Description | Source |
| -------------------------------- | ------------------------------------------------------------ | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| Great tit songs | Dawn songs from male birds in a population in Oxford, UK | Nilo M. Recalde |
| European storm-petrel purr songs | Males singing from burrows in the Shetland and Faroe islands | XC46092 © Dougie Preston
XC663885 © Simon S. Christiansen // CC licence |
| Bengalese finch songs | Recordings from two isolated Bengalese finches | Originally published in Tachibana, Koumura & Okanoya (2015) Data: DOI |
License
The project is licensed under the MIT license.
Citation
If you use pykanto in your own work, please cite the associated article and/or
the repository:
Acknowledgements
Some of the methods that are part of
pykantoare directly inspired by or adapted from Sainburg, Thielk and Gentner (2020). I have indicated where this is the case in the relevant method's docstring.The
dereverberatefunction is based on code by Robert Lachlan that is part of Luscinia, a powerful software for bioacoustic archiving, measurement and analysis.I have learnt a lot about packaging and python by perusing the structure of projects by NickleDave. I became aware of VocalPy, a project that aims to "develop an ecosystem of interoperable packages" for "computational vocal communication and learning research" when I had already written most of
pykanto, but eventually I'd like to make it compatible with it: standardisation is direly needed in the field and I don't want to contribute to the chaos.
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© Nilo M. Recalde, 2021-present
Owner
- Name: Nilo
- Login: nilomr
- Kind: user
- Location: Oxford, UK
- Company: Edward Grey Institute, Department of Zoology
- Website: https://www.biology.ox.ac.uk/people/nilo-merino-recalde-0
- Twitter: nilomr
- Repositories: 3
- Profile: https://github.com/nilomr
PhD student @OxfordUniversity working on bird song learning and cultural evolution.
Citation (CITATION.cff)
cff-version: 1.2.0 message: "If you use this software, please cite it as below." authors: - family-names: "Merino Recalde" given-names: "Nilo" orcid: "https://orcid.org/0000-0003-3903-1288" title: "pykanto-example" version: 0.1.7 doi: 10.5281/zenodo.7941355 date-released: 2023-05-02 url: "https://github.com/nilomr/pykanto"
GitHub Events
Total
- Create event: 1
- Release event: 3
- Issues event: 4
- Watch event: 8
- Issue comment event: 13
- Push event: 8
Last Year
- Create event: 1
- Release event: 3
- Issues event: 4
- Watch event: 8
- Issue comment event: 13
- Push event: 8
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 30
- Total pull requests: 8
- Average time to close issues: 18 days
- Average time to close pull requests: 1 day
- Total issue authors: 7
- Total pull request authors: 2
- Average comments per issue: 1.67
- Average comments per pull request: 0.38
- Merged pull requests: 8
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 3
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 2
- Pull request authors: 0
- Average comments per issue: 2.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- nilomr (11)
- gg4u (7)
- ArKornreich (3)
- athenasyarifa (2)
- saguileran (2)
- WalidERRAIS (2)
- advaymishra2003 (1)
- masonyoungblood (1)
Pull Request Authors
- nilomr (7)
- WalidERRAIS (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 28 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 10
- Total maintainers: 1
pypi.org: pykanto
A library for managing and analysing animal vocalisation data.
- Documentation: https://nilomr.github.io/pykanto
- License: MIT License
-
Latest release: 0.1.8
published over 1 year ago