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oursin

Universal Renderer for Neuroscience

https://github.com/virtualbrainlab/urchin

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.6%) to scientific vocabulary
Last synced: 9 months ago · JSON representation ·

Repository

Universal Renderer for Neuroscience

Basic Info
  • Host: GitHub
  • Owner: VirtualBrainLab
  • License: gpl-3.0
  • Language: C#
  • Default Branch: develop
  • Homepage:
  • Size: 289 MB
Statistics
  • Stars: 14
  • Watchers: 1
  • Forks: 3
  • Open Issues: 20
  • Releases: 14
Created over 4 years ago · Last pushed 12 months ago
Metadata Files
Readme License Code of conduct Citation

README.md

urchin

PyPI Version Downloads

Urchin is a Python API that links your analysis scripts to a standalone renderer program, to create graphics like the ones below.

Quickstart

To install the package run pip install oursin. To get started open a Python terminal and run:

import oursin as urchin urchin.setup()

Tutorials

We have many tutorials available that introduce the functionality in Urchin.

Documentation

For detailed instructions please see the documentation.

Urchin for Unity

The Urchin package can be embedded into a Unity application by adding the package: https://github.com/VirtualBrainLab/Urchin.git?path=/UnityClient/Packages/vbl.urchin

Citing

DOI

If Urchin is used as part of a research project you should cite this repository. We've created a DOI for this purpose on Zenodo. Your citations will help us get grant support for this project in the future!

Owner

  • Name: Virtual Brain Lab
  • Login: VirtualBrainLab
  • Kind: organization
  • Email: info@virtualbrainlab.org

The VBL builds intuitive and interactive 3D visualizations for neuroscience.

Citation (CITATION.cff) 

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
title: >-
  Urchin: Neuroscience data visualization in a stateful
  interactive web-based 3D environment
message: >-
  If you use this software, please cite it using the
  metadata from this file.
type: software
authors:
  - given-names: Daniel
    family-names: Birman
    affiliation: University of Washington
  - given-names: Nicholas
    name-particle: A
    family-names: Steinmetz
    affiliation: University of Washington
identifiers:
  - type: doi
    value: 10.5281/zenodo.7839041
repository-code: 'https://github.com/VirtualBrainLab/Urchin'
url: >-
  https://virtualbrainlab.org/urchin/installation_and_use.html

GitHub Events

Total
  • Issues event: 14
  • Watch event: 4
  • Delete event: 2
  • Issue comment event: 10
  • Push event: 12
  • Pull request event: 6
  • Fork event: 1
  • Create event: 2
Last Year
  • Issues event: 14
  • Watch event: 4
  • Delete event: 2
  • Issue comment event: 10
  • Push event: 12
  • Pull request event: 6
  • Fork event: 1
  • Create event: 2

Issues and Pull Requests

Last synced: 9 months ago

All Time
  • Total issues: 153
  • Total pull requests: 31
  • Average time to close issues: 6 months
  • Average time to close pull requests: 2 months
  • Total issue authors: 4
  • Total pull request authors: 4
  • Average comments per issue: 1.23
  • Average comments per pull request: 0.45
  • Merged pull requests: 18
  • Bot issues: 0
  • Bot pull requests: 19
Past Year
  • Issues: 5
  • Pull requests: 4
  • Average time to close issues: about 1 month
  • Average time to close pull requests: 3 months
  • Issue authors: 2
  • Pull request authors: 1
  • Average comments per issue: 1.4
  • Average comments per pull request: 0.25
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 4
View more stats
Top Authors
Issue Authors
  • dbirman (120)
  • jasmine-schoch (30)
  • arjunsridhar12345 (2)
  • hummuscience (1)
Pull Request Authors
  • dependabot[bot] (22)
  • dbirman (10)
  • kjy5 (1)
  • jasmine-schoch (1)
Top Labels
Issue Labels
feature (65) bug (51) wontfix (4) duplicate (1)
Pull Request Labels
dependencies (22)

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 118 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 25
  • Total maintainers: 1
pypi.org: oursin

Urchin - Universal Renderer Creating Helpful Images for Neuroscience Python API

  • Versions: 25
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 118 Last month
Rankings
Dependent packages count: 10.1%
Downloads: 10.5%
Average: 14.1%
Dependent repos count: 21.6%
Maintainers (1)
pypidb
Last synced: 9 months ago