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kraken_howto_ga_workflows

How to guide for taxonomy workflow with Kraken on Galaxy australia

https://github.com/vmurigneu/kraken_howto_ga_workflows

Science Score: 57.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
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    Institutional organization owner
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    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (3.9%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

How to guide for taxonomy workflow with Kraken on Galaxy australia

Basic Info
  • Host: GitHub
  • Owner: vmurigneu
  • License: mit
  • Language: SCSS
  • Default Branch: main
  • Size: 4.88 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 1 year ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog License Citation

README.md

About

This is the taxonomy classification using Kraken2 in Galaxy Australia howto documentation. View here: https://vmurigneu.github.io/krakenhowtoga_workflows/index

Acknowledgements for the guides

This work is supported by the Australian BioCommons via funding from Bioplatforms Australia, the Australian Research Data Commons (https://doi.org/10.47486/PL105) and the Queensland Government RICF programme. Bioplatforms Australia and the Australian Research Data Commons are funded by the National Collaborative Research Infrastructure Strategy (NCRIS).

This repository makes use of the ELIXIR toolkit theme: theme badge

This template is based on the ELIXIR Toolkit Theme example.

Owner

  • Name: Valentine Murigneux
  • Login: vmurigneu
  • Kind: user
  • Location: Brisbane
  • Company: The University of Queensland

Citation (CITATION.cff) 

cff-version: 0.0.0
message: "Please cite as below."
authors:
  - given-names: Valentine 
    family-names: Murigneux
    affiliation: QCIF Bioinformatics
    orcid: https://orcid.org/0000-0002-1235-9462
  - given-names: Mike
    family-names: Thang
    affiliation: QCIF Bioinformatics
    orcid: https://orcid.org/0000-0002-1480-3563
title: "Taxonomy classification using Kraken2 on Galaxy Australia"
version: 0.0.0
doi: [DOI goes here]
date-released: YYYY-MM-DD

GitHub Events

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  • Push event: 19
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  • Push event: 19

Dependencies

.github/workflows/jekyll.yml actions
  • actions/checkout v3 composite
  • actions/configure-pages v2 composite
  • actions/upload-pages-artifact v1 composite
  • ruby/setup-ruby v1.127.0 composite
Gemfile rubygems
  • github-pages >= 0