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ecgrat

This repository contains a tool for calculating heart rate variability in Wistar rats, developed in Python with the Kivy library.

https://github.com/mariizero/ecgrat

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.3%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

This repository contains a tool for calculating heart rate variability in Wistar rats, developed in Python with the Kivy library.

Basic Info
  • Host: GitHub
  • Owner: Mariizero
  • License: mit
  • Language: Python
  • Default Branch: main
  • Homepage:
  • Size: 3.57 MB
Statistics
  • Stars: 1
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created over 1 year ago · Last pushed over 1 year ago
Metadata Files
Readme License Citation Codemeta

Readme.md

This file contains the installation instructions, in English and Portuguese. Esse arquivo contém as instruções de instalação em inglês e português.

--------English-version-----------

This repository contains a tool for calculating heart rate variability in Wistar rats, developed in Python with the Kivy library.

Instructions for downloading and running:

Download all files from the repository, including the images required for the interface.

Open the main file "ecgRat" in Visual Studio Code or another compatible program for running Python code.

Make sure you have Python installed on your machine, along with the required libraries.

To make it easier to understand the signal processing, we have also included a Jupyter Notebook file "ECGRATnotebook" with detailed explanations.

Updates: This project is still under development and may undergo changes in the coming months. When the final version is available, we will add a build to simplify the installation and use of the tool.

-------Versão-em-Português---------

Este repositório contém uma ferramenta para o cálculo da variabilidade cardíaca em ratos Wistar, desenvolvida em Python com a biblioteca Kivy.

Instruções para download e execução:

Baixe todos os arquivos do repositório, incluindo as imagens necessárias para a interface. Abra o arquivo principal "ecgRat" no Visual Studio Code ou em outro programa compatível para execução de código Python. Certifique-se de ter o Python instalado em sua máquina, juntamente com as bibliotecas requeridas. Para facilitar o entendimento do processamento do sinal, incluímos também um arquivo em Jupyter Notebook "ECGRATnotebook" com explicações detalhadas.

Atualizações: Este projeto ainda está em desenvolvimento e pode sofrer alterações nos próximos meses. Quando a versão final estiver disponível, adicionaremos uma build para simplificar a instalação e o uso da ferramenta.

Owner

  • Login: Mariizero
  • Kind: user

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software in your research, please cite it as below."
title: "ECG Rat"
authors:
- family-names: "Valério"
  given-names: "Mariana" 
  email: "marianavalerio566@gmail.com"
  affiliation: "University of Mogi das Cruzes"
  orcid: "https://orcid.org/0000-0001-8323-9815"
- family-names: "Becker"
  given-names: "Silvia"
  affiliation: "Karlsruhe Institute of Technology"
  orcid: "https://orcid.org/0000-0002-1135-6446"
- family-names: "Houillon"
  given-names: "Marie"
  affiliation: "Karlsruhe Institute of Technology"
  orcid: "https://orcid.org/0000-0002-6584-0233"
- family-names: "Loewe"
  given-names: "Axel"
  email: "axel.loewe@kit.edu" 
  affiliation: "Karlsruhe Institute of Technology"
  orcid: "https://orcid.org/0000-0002-2487-4744" 
- family-names: "Silva"
  given-names: "Alessandro"
  email: "alessandrops@umc.br"
  affiliation: "University of Mogi das Cruzes"
  orcid: "https://orcid.org/0000-0003-4766-8617"
license: MIT
repository-code: "https://github.com/Mariizero/ECGRat.git"

CodeMeta (codemeta.json) 

{
  "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
  "type": "SoftwareSourceCode",
  "applicationCategory": "Bioengineering",
  "author": [
    {
      "id": "https://orcid.org/0000-0001-8323-9815",
      "type": "Person",
      "affiliation": {
        "type": "Organization",
        "name": "University of Mogi das Cruzes"
      },
      "email": "marianavalerio566@gmail.com",
      "familyName": "Valrio",
      "givenName": "Mariana"
    },
    {
      "id": "https://orcid.org/0000-0002-1135-6446",
      "type": "Person",
      "affiliation": {
        "type": "Organization",
        "name": "Karlsruhe Institute of Technology"
      },
      "familyName": "Becker",
      "givenName": "Silvia"
    },
    {
      "id": "https://orcid.org/0000-0002-6584-0233",
      "type": "Person",
      "affiliation": {
        "type": "Organization",
        "name": "Karlsruhe Institute of Technology"
      },
      "familyName": "Houillon",
      "givenName": "Marie"
    },
    {
      "id": "https://orcid.org/0000-0002-2487-4744",
      "type": "Person",
      "affiliation": {
        "type": "Organization",
        "name": "Karlsruhe Institute of Technology"
      },
      "email": "axel.loewe@kit.edu",
      "familyName": "Loewe",
      "givenName": "Axel"
    },
    {
      "id": "https://orcid.org/0000-0003-4766-8617",
      "type": "Person",
      "affiliation": {
        "type": "Organization",
        "name": "University of Mogi das Cruzes"
      },
      "email": "alessandrops@umc.br",
      "familyName": "Silva",
      "givenName": "Alessandro"
    }
  ],
  "codeRepository": "https://github.com/Mariizero/ECGRATproject.git",
  "dateCreated": "2024-10-31",
  "datePublished": "2024-11-10",
  "description": "This software calculates heart rate and cardiac variability from ECG of Wistar rats.",
  "funder": {
    "type": "Organization",
    "name": "Deutscher Akademischer Austauschdienst"
  },
  "keywords": [
    "Cardiac variability",
    "Rat",
    "Electrocardiogram",
    "Tool"
  ],
  "license": "https://spdx.org/licenses/MIT",
  "name": "ECG Rat",
  "operatingSystem": [
    "macOS",
    "Windows"
  ],
  "programmingLanguage": "Python 3",
  "version": "1.0.0",
  "funding": "Daad_2024"
}

GitHub Events

Total
  • Release event: 1
  • Watch event: 1
  • Push event: 3
  • Create event: 3
Last Year
  • Release event: 1
  • Watch event: 1
  • Push event: 3
  • Create event: 3

Dependencies

.github/actions/setvars/action.yml actions
.github/workflows/create-metadata.yml actions
  • ./.github/actions/setvars * composite
  • actions/checkout v4 composite
  • actions/upload-artifact v4 composite
.github/workflows/pre-release.yml actions
  • ./.github/actions/setvars * composite
  • actions/checkout v4 composite
.github/workflows/release.yml actions
  • ./.github/actions/setvars * composite
  • actions/checkout v4 composite
  • actions/download-artifact v4 composite