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https://github.com/bluebrain/nexus-web-plugins

Nexus Fusion plugins

https://github.com/bluebrain/nexus-web-plugins

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.6%) to scientific vocabulary

Keywords

gui neuroscience
Last synced: 5 months ago · JSON representation

Repository

Nexus Fusion plugins

Basic Info
Statistics
  • Stars: 1
  • Watchers: 8
  • Forks: 1
  • Open Issues: 1
  • Releases: 0
Topics
gui neuroscience
Created over 4 years ago · Last pushed over 1 year ago
Metadata Files
Readme Contributing License Authors

README.md

Nexus Fusion plugins

This project contains Nexus Fusion Plugins that were originally developed for Blue Blrain and a development environment for them.

Development

Dev environment can be started with:

bash $ make run_dev

Build

Build consists of multiple stages:

  • build ts sources into js bundles
  • create a plugin manifest.json
  • build a docker image to serve artifacts mentioned above

Can be started with:

bash $ make build_image

When calling this target all necessary dependencies will be managed by make.

Makefile also contains targets corresponding to each separate build step.

For testing the plugins from within Fusion locally you can run the first two steps of the build process above and then serve these files up using express to which you can point your local Fusion instance at.

bash $ make build_dist_and_host

Deployment

When docker image has been built it can be pushed into docker registry by invoking:

bash $ make push_image

Note that push_image target isn't dependent on build_image, so it will push current version of the image present.

Citation

When you use this software, we kindly ask you to cite the following publication:

[Sy, Mohameth François; Roman, Bogdan; Kerrien, Samuel; Mendez, Didac Montero; Genet, Henry; Wajerowicz, Wojciech; Dupont, Michaël; Lavriushev, Ian; Machon, Julien; Pirman, Kenneth; Neela Mana, Dhanesh; Stafeeva, Natalia; Kaufmann, Anna-Kristin; Lu, Huanxiang; Lurie, Jonathan; Fonta, Pierre-Alexandre; Martinez, Alejandra Garcia Rojas; Ulbrich, Alexander D.; Lindqvist, Carolina; Jimenez, Silvia; Rotenberg, David; Markram, Henry; Hill, Sean L. (2023). Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science. Semantic Web, 2023, Volume 14, Issue 4, p. 697-727 https://doi.org/10.3233/sw-222974.

Funding & Acknowledgment

The development of this software was supported by funding to the Blue Brain Project, a research center of the École polytechnique fédérale de Lausanne (EPFL), from the Swiss government's ETH Board of the Swiss Federal Institutes of Technology.

Copyright © 2015-2024 Blue Brain Project/EPFL

Owner

  • Name: The Blue Brain Project
  • Login: BlueBrain
  • Kind: organization
  • Email: bbp.opensource@epfl.ch
  • Location: Geneva, Switzerland

Open Source Software produced and used by the Blue Brain Project

GitHub Events

Total
  • Watch event: 1
  • Public event: 1
  • Fork event: 1
Last Year
  • Watch event: 1
  • Public event: 1
  • Fork event: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 0
  • Total pull requests: 8
  • Average time to close issues: N/A
  • Average time to close pull requests: 1 day
  • Total issue authors: 0
  • Total pull request authors: 3
  • Average comments per issue: 0
  • Average comments per pull request: 0.13
  • Merged pull requests: 7
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 2
  • Average time to close issues: N/A
  • Average time to close pull requests: 8 days
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.5
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • samuel-kerrien (5)
  • Dinika (2)
  • bbpgithubaudit (1)
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Dependencies

.github/workflows/branch-push.yml actions
  • actions/checkout v4 composite
  • actions/setup-node v4 composite
Dockerfile docker
  • nginx alpine build
package-lock.json npm
  • 2098 dependencies
package.json npm
  • @testing-library/jest-dom ^4.2.4 development
  • @testing-library/react ^9.3.2 development
  • @testing-library/user-event ^7.1.2 development
  • @types/d3 ^5.9.2 development
  • @types/dygraphs ^1.1.10 development
  • @types/file-saver ^2.0.1 development
  • @types/jest ^24.0.0 development
  • @types/lodash ^4.14.149 development
  • @types/node ^12.0.0 development
  • @types/plotly.js-basic-dist ^1.54.0 development
  • @types/query-string ^6.3.0 development
  • @types/react ^16.9.0 development
  • @types/react-dom ^16.9.0 development
  • @types/showdown ^1.9.3 development
  • less ^3.11.1 development
  • less-loader ^5.0.0 development
  • lint-staged ^10.0.8 development
  • mini-css-extract-plugin ^0.9.0 development
  • prettier ^1.19.1 development
  • react-scripts ^3.4.3 development
  • ts-lint ^4.5.1 development
  • ts-loader ^6.2.1 development
  • tslint ^6.0.0 development
  • tslint-config-airbnb ^5.11.2 development
  • tslint-config-prettier ^1.18.0 development
  • tslint-react-hooks ^2.2.1 development
  • typescript ~3.9.9 development
  • webpack-cli ^3.3.11 development
  • @ant-design/icons ^4.4.0
  • @bbp/nexus-sdk ^1.3.0
  • @types/plotly.js ^1.50.14
  • @types/react-plotly.js ^2.2.4
  • @types/three ^0.103.2
  • antd ^4.9.1
  • codemirror ^5.52.0
  • d3 ^5.16.0
  • distinct-colors ^3.0.0
  • downsample ^1.4.0
  • dygraphs ^2.1.0
  • express ^4.18.2
  • file-saver ^2.0.2
  • handlebars ^4.7.6
  • js-yaml ^3.14.0
  • json-stringify-pretty-compact ^2.0.0
  • lodash ^4.17.20
  • moment ^2.29.1
  • morphoviewer ^0.1.20
  • node-cache-engine ^1.1.0
  • oidc-client ^1.10.1
  • pako ^1.0.11
  • plotly.js ^1.54.6
  • plotly.js-basic-dist ^2.5.1
  • react ^16.12.0
  • react-codemirror2 ^6.0.0
  • react-dom ^16.12.0
  • react-image-lightbox ^5.1.1
  • react-markdown ^5.0.2
  • react-plotly.js ^2.5.0
  • react-responsive-carousel ^3.2.7
  • showdown ^1.9.1
  • swcmorphologyparser ^0.1.10
  • three ^0.120.1
  • ts-pattern ^1.1.0
  • webpack-bundle-analyzer ^4.5.0
  • xss ^1.0.8
src/plugins/circuit/package.json npm
src/plugins/image-collection-viewer/package.json npm
src/plugins/markdown/package.json npm
src/plugins/metadata/package.json npm
src/plugins/neuron-electrophysiology/package.json npm
src/plugins/neuron-morphology/package.json npm
src/plugins/notebook-preview/package.json npm
src/plugins/sim-campaign-config/package.json npm
src/plugins/simulation/package.json npm
src/plugins/simulation-campaign/package.json npm