https://github.com/bluebrain/neurots - 3.7.0

What's Changed

• Chore: Bump Copier template by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/108
• CI(dependabot): Bump mikepenz/action-junit-report from 4 to 5 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/110
• Docs: Fix RTD by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/109
• CI(dependabot): Bump codecov/codecov-action from 4 to 5 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/111
• Add context handling with accept/reject by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/61
• Fix: Make bifurcation angles globally invariant by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/95
• Fix: Fix AR algo by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/112
• Release: 3.7.0 by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/113

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.6.0...3.7.0

- Python
Published by arnaudon over 1 year ago

https://github.com/bluebrain/neurots - 3.6.0

What's Changed

• CI(dependabot): Bump actions/setup-python from 4 to 5 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/97
• CI(dependabot): Bump actions/upload-artifact from 3 to 4 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/98
• CI(dependabot): Bump actions/cache from 3 to 4 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/99
• Fix: Better first_point fix by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/96
• Chore: Remove some warnings by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/100
• CI(dependabot): Bump codecov/codecov-action from 3 to 4 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/101
• Fix: Astrocyte grower infinite loop by @jacquemi-bbp in https://github.com/BlueBrain/NeuroTS/pull/104
• Build: Freeze docutils version to be compatible with m2r2 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/105
• Chore: Change license from GPLv3 to Apache-v2 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/106
• Release: 3.6.0 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/107

New Contributors

• @jacquemi-bbp made their first contribution in https://github.com/BlueBrain/NeuroTS/pull/104

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.5.0...3.6.0

- Python
Published by adrien-berchet about 2 years ago

https://github.com/bluebrain/neurots - 3.5.0

What's Changed

• Update CHANGELOG by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/84
• Feat: Add majorterminationlength parameter by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/78
• Feat: Add a uniform diameter model and deprecate the 'radius' parameter by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/85
• Fix: Allow for non-default neurite_types by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/86
• Test: Improve coverage for the uniform diameter model by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/88
• Feat: Allow for single basal by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/89
• Fix: Allow for normal orientation with basals by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/90
• CI(dependabot): Bump actions/setup-node from 3 to 4 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/91
• Feat: Drop radius entry from parameters by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/92
• Release: 3.5.0 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/93

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.4.2...3.5.0

- Python
Published by adrien-berchet over 2 years ago

https://github.com/bluebrain/neurots - 3.4.2

What's Changed

• Chore: Apply Copier template by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/82
• CI(dependabot): Bump mikepenz/action-junit-report from 3 to 4 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/81
• Feat: Fix default diam distr by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/83

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.4.1...3.4.2

- Python
Published by arnaudon almost 3 years ago

https://github.com/bluebrain/neurots - 3.4.1

What's Changed

• Fix: Handle near symetrical two major apical branches by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/75
• Fix: Explicitly write soma type by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/77
• CI: Push all versions to Codecov and artifacts by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/79
• Bump actions/checkout from 3 to 4 by @dependabot in https://github.com/BlueBrain/NeuroTS/pull/80

New Contributors

• @dependabot made their first contribution in https://github.com/BlueBrain/NeuroTS/pull/80

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.4.0...3.4.1

- Python
Published by arnaudon almost 3 years ago

https://github.com/bluebrain/neurots - 3.4.0

What's Changed

• Fix: Relax soma/first point check by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/68
• Fix: Allow for normal_pia to have any pia direction by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/70
• Build: Relax numpy max version by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/72
• CI: Add template for issues and pull requests by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/73
• Release: 3.4.0 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/74

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.3.2...3.4.0

- Python
Published by adrien-berchet about 3 years ago

https://github.com/bluebrain/neurots - 3.3.2

What's Changed

• Fix: Raise clear errors for empty angles by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/65
• Release: 3.3.2 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/66

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.3.1...3.3.2

- Python
Published by adrien-berchet about 3 years ago

https://github.com/bluebrain/neurots - 3.3.1

What's Changed

• Fix: Convert apical_sections to new id by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/60

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.3.0...3.3.1

- Python
Published by arnaudon over 3 years ago

https://github.com/bluebrain/neurots - Version 3.3.0

What's Changed

• Fix schemas and tests by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/44
• Refactor: Apply Copier template by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/46
• Build: Use findnamespacepackages instead of find_packages by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/48
• Chore: Fix language detection by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/50
• Fix: Report errors in lists properly by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/51
• CI: Test with minimal versions of dependencies and add support for py310 and py311 by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/53
• Use diameter-synthesis by default by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/47
• CI: Apply Copier template by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/55
• Feat: Rework input validation process by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/52
• Chore: Apply Copier template by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/57
• CI: Separate job for min_versions to speedup the CI by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/58
• 3d trunk angles by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/49
• Changelog for v3.3.0 by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/59

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.2.0...3.3.0

- Python
Published by arnaudon over 3 years ago

https://github.com/bluebrain/neurots -

- Python
Published by arnaudon almost 4 years ago

https://github.com/bluebrain/neurots - 3.1.1

What's Changed

• Setup CodeCov by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/20

Full Changelog: https://github.com/BlueBrain/NeuroTS/compare/3.1.0...3.1.1

- Python
Published by adrien-berchet over 4 years ago

https://github.com/bluebrain/neurots - 3.1.0

What's Changed

• Change license and open the sources by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/1
• Fix tests/astrocyte/testgrower.py::testgrow__run test by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/6
• Improve installation section in README by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/4
• Add codespell in lint by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/7
• Adding logo for NeuroTS by @alex4200 in https://github.com/BlueBrain/NeuroTS/pull/8
• Fix banner in doc by @alex4200 in https://github.com/BlueBrain/NeuroTS/pull/9
• default to use_morphio by @arnaudon in https://github.com/BlueBrain/NeuroTS/pull/10
• Improve readme file by @lidakanari in https://github.com/BlueBrain/NeuroTS/pull/5
• Update CONTRIBUTING.md by @alex4200 in https://github.com/BlueBrain/NeuroTS/pull/11
• Can pass parameters to the external diametrizer by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/13
• Update examples by @lidakanari in https://github.com/BlueBrain/NeuroTS/pull/12
• Make citation more clear and slightly improve coverage by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/16
• Remove run time from gallery pages by @adrien-berchet in https://github.com/BlueBrain/NeuroTS/pull/17
• Update README.md by @alex4200 in https://github.com/BlueBrain/NeuroTS/pull/18

New Contributors

• @alex4200 made their first contribution in https://github.com/BlueBrain/NeuroTS/pull/8
• @arnaudon made their first contribution in https://github.com/BlueBrain/NeuroTS/pull/10
• @lidakanari made their first contribution in https://github.com/BlueBrain/NeuroTS/pull/5

Full Changelog: https://github.com/BlueBrain/NeuroTS/commits/3.1.0

- Python
Published by adrien-berchet over 4 years ago