https://github.com/bluegreen-labs/swift_lunar_synchrony
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 6 DOI reference(s) in README -
✓Academic publication links
Links to: wiley.com, zenodo.org -
○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.2%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: bluegreen-labs
- License: cc-by-4.0
- Language: R
- Default Branch: main
- Homepage: https://bluegreen-labs.github.io/swift_lunar_synchrony/
- Size: 30.1 MB
Statistics
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 2
Metadata Files
README.md
Evaluating the effects of moonlight on the vertical flight profiles of three western palearctic swifts
Koen Hufkens, Christoph M. Meier, Ruben Evens, Josefa Arán Paredes, Hakan Karaardiç, Stef Vercauteren, Ann Van Gijsel, James W. Fox, Carlos Miguel Pacheco, Luis P. da Silva, Sandra Fernandes, Pedro Henriques, Gonçalo Elias, Luís T. Costa, Martin Poot, Lyndon Kearsley
Abstract
Recent studies have suggested the presence of moonlight mediated behaviour in avian aerial insectivores, such as swifts. Here, we use the combined analysis of state-of-the-art activity logger data across three swift species, the Common, Pallid and Alpine swifts, to quantify flight height and activity in responses to moonlight driven crepuscular and nocturnal light conditions. Our results show a significant response in flight heights to moonlight illuminance for Common and Pallid swifts, i.e. when moon illuminance increased flight height also increased, while a moonlight driven response is absent in Alpine swifts. We show a weak relationship between night-time illuminance driven responses and twilight ascending behaviour, suggesting a decoupling of both crepuscular and night-time behaviour. We suggest that swifts optimise their flight behaviour to adapt to favourable night-time light conditions, driven by light responsive and size-dependent vertical insect stratification and weather conditions.
Please cite as: Hufkens Koen, Meier Christoph M., Evens Ruben, Paredes Josefa Arán, Karaardiç Hakan, Vercauteren Stef, Van Gysel Ann, Fox James W., Pacheco Carlos Miguel, da Silva Luis P., Fernandes Sandra, Henriques Pedro, Elias Gonçalo, Costa Luís T., Poot Martin and Kearsley Lyndon. 2023. Evaluating the effects of moonlight on the vertical flight profiles of three western palaearctic swiftsProc. R. Soc. B. 2902023095720230957. http://doi.org/10.1098/rspb.2023.0957

Use
Clone or download the project zip file.
bash
git clone https://github.com/bluegreen-labs/swift_lunar_synchrony.git
The repository is an R project and can be opened in RStudio, which will set the correct relative path.
Data structure & analysis
Analysis data is saved as compressed R serial files (.rds) in the data folder. Scripts to reproduce the main statistical results are provided in the analysis folder. Data contain the below fields:
| Variable | Description | |------------------|--------------------------------------------------------------------------------------| | tag | tag id of the data logger used (alpha-numeric) | | species | swift species | | lagaltitude | lagged altitude to account for correlations in the residuals of models | | moonilluminance | moon illuminance (in lux) | | moon_phase | moon phase (descriptive) | | stages | stages of the day (day, dawn, dusk, night) | | altbin | Altitude bin, if data is low or high (0, 1) |
Related work
This study is follow up work of our paper in Oikos titled: "The aeroecology of atmospheric convergence zones: the case of pallid swifts". You can find this dataset on Zenodo here
Licensing
Be mindful of the CC-BY 4.0 license of the data and figures. Reuse is permitted on the condition of proper attribution and documentation of any changes.
Owner
- Name: BlueGreen Labs
- Login: bluegreen-labs
- Kind: organization
- Email: info@bluegreenlabs.org
- Location: Melsele, Belgium
- Website: http://bluegreenlabs.org
- Repositories: 17
- Profile: https://github.com/bluegreen-labs
BlueGreen open science labs & consulting, providing environmental research infrastructure and editorial solutions.
GitHub Events
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Last synced: over 2 years ago
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| Name | Commits | |
|---|---|---|
| Koen Hufkens | k****s@g****m | 29 |
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Dependencies
- JamesIves/github-pages-deploy-action v4.4.1 composite
- actions/checkout v3 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- R >= 4.2 depends
- glmmTMB * imports
- here * imports
- lme4 * imports
- report * imports
- tidyverse * imports
- rmarkdown * suggests