https://github.com/bodenmillergroup/bcmet_publication_scripts
https://github.com/bodenmillergroup/bcmet_publication_scripts
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 1 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.5%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: BodenmillerGroup
- Language: R
- Default Branch: main
- Size: 101 KB
Statistics
- Stars: 1
- Watchers: 5
- Forks: 1
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
BCmetpublicationscripts
A workflowr project.
Distant metastases of breast cancer resemble primary tumors in tumor cell composition but differ in immune cell phenotypes
This repository contains all code used to produce the results of the publication "Distant metastases of breast cancer resemble primary tumors in tumor cell composition but differ in immune cell phenotypes". All data, including tiff images, masks, single-cell and patient data are available on Zenodo (https://zenodo.org/doi/10.5281/zenodo.10498366).
Important note when working with the scripts
Please be aware that no seed was set for analyses involving random processes, such as clustering, in these scripts. To ensure full reproducibility of the data, please refer to the cluster information annotated in the single-cell experiment objects available on Zenodo.
Owner
- Name: BodenmillerGroup
- Login: BodenmillerGroup
- Kind: organization
- Repositories: 83
- Profile: https://github.com/BodenmillerGroup
GitHub Events
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- Watch event: 1
- Fork event: 1
Last Year
- Watch event: 1
- Fork event: 1
Issues and Pull Requests
Last synced: over 1 year ago
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- Total pull requests: 0
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- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
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- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0