Octopus Sensing
Octopus Sensing: A Python library for human behavior studies - Published in JOSS (2022)
Science Score: 95.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 1 DOI reference(s) in JOSS metadata -
○Academic publication links
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✓Committers with academic emails
1 of 7 committers (14.3%) from academic institutions -
○Institutional organization owner
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✓JOSS paper metadata
Published in Journal of Open Source Software
Keywords
Scientific Fields
Repository
Basic Info
- Host: GitHub
- Owner: octopus-sensing
- License: gpl-3.0
- Language: Python
- Default Branch: master
- Homepage: https://octopus-sensing.nastaran-saffar.me/
- Size: 1.34 MB
Statistics
- Stars: 16
- Watchers: 3
- Forks: 9
- Open Issues: 15
- Releases: 0
Topics
Metadata Files
README.md
Octopus Sensing
Octopus Sensing is a tool to help you run scientific experiments that involve recording data synchronously from multiple sources in human-computer interaction studies. You write steps of an experiment scenario, for example showing a stimulus and then a questionnaire. The tool takes care of the rest.
It can collect data from multiple devices such as OpenBCI EEG headset, Shimmer sensor (GSR and PPG), Video and Audio and so forth simultaneously. Data collection can be started and stopped synchronously across all devices. Collected data will be tagged with the timestamp of the start and stop of the experiment, the ID of the experiment, etc.
The aim is to make the scripting interface so simple that people with minimum or no software development skills can define experiment scenarios with no effort. Also, this tool can be used as the base structure for creating real-time data processing systems like systems with capabilities of recognizing emotions, stress, cognitive load, or analyzing human behaviors.
To see the full documentation visit the Octopus Sensing website.
When using the package in your research, please cite:
Saffaryazdi, N., Gharibnavaz, A., & Billinghurst, M. (2022). Octopus Sensing: A Python library for human behavior studies. Journal of Open Source Software, 7(71), 4045.
Main features
- Controls data recording from multiple sources using a simple unified interface
- Tags an event on collected data, such as the start of an experiment, and events during the experiment, etc.
- Can show stimuli (images and videos) and questionnaires
- Monitoring interface that visualizes collected data in real-time
- Offline visualization of data from multiple sources simultanously
Copyright
Copyright © 2020-2023 Nastaran Saffaryazdi, Aidin Gharibnavaz
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
See License file for full terms.
Owner
- Name: octopus-sensing
- Login: octopus-sensing
- Kind: organization
- Repositories: 4
- Profile: https://github.com/octopus-sensing
JOSS Publication
Octopus Sensing: A Python library for human behavior studies
Authors
Empathic Computing Laboratory, Auckland Bioengineering Institute, University of Auckland
Independent Researcher
Empathic Computing Laboratory, Auckland Bioengineering Institute, University of Auckland, Empathic Computing Laboratory, University of South Australia
Editor
Andrew Stewart
Tags
Javascript Human-Computer-Interaction(HCI) Human behavior research Physiological Signals Electroencephalography Multimodal Sensors Synchronous data acquisition Data visuaization Affective Computing Experimental designGitHub Events
Total
- Watch event: 4
- Delete event: 8
- Issue comment event: 2
- Push event: 31
- Pull request event: 7
- Create event: 14
Last Year
- Watch event: 4
- Delete event: 8
- Issue comment event: 2
- Push event: 31
- Pull request event: 7
- Create event: 14
Committers
Last synced: 5 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Nastaran | n****r@g****m | 180 |
| Aidin Gharibnavaz | a****n@a****m | 77 |
| raynehe | h****o@1****m | 12 |
| gabriela-vega | g****1@h****m | 6 |
| Nastaran Saffaryazdi | z****9@b****z | 5 |
| gabriela-vega | g****l@a****h | 3 |
| Daniel S. Katz | d****z@i****g | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 4 months ago
All Time
- Total issues: 15
- Total pull requests: 60
- Average time to close issues: 28 days
- Average time to close pull requests: about 1 month
- Total issue authors: 5
- Total pull request authors: 7
- Average comments per issue: 0.93
- Average comments per pull request: 0.28
- Merged pull requests: 49
- Bot issues: 0
- Bot pull requests: 4
Past Year
- Issues: 0
- Pull requests: 5
- Average time to close issues: N/A
- Average time to close pull requests: 14 days
- Issue authors: 0
- Pull request authors: 2
- Average comments per issue: 0
- Average comments per pull request: 0.4
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- aidin36 (6)
- nastaran62 (5)
- SrikrishnaBhat (2)
- HaowenWeiJohn (1)
- ryohajika (1)
Pull Request Authors
- aidin36 (37)
- nastaran62 (13)
- dependabot[bot] (4)
- vegabs (3)
- raynehe (3)
- rikuotono (1)
- danielskatz (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- pypi 54 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 20
- Total maintainers: 1
pypi.org: octopus-sensing
Library for recording data synchronously from different physiological sensors
- Homepage: https://octopus-sensing.nastaran-saffar.me
- Documentation: https://octopus-sensing.readthedocs.io/
- License: GPL-3.0-or-later
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Latest release: 4.3.3
published 5 months ago
Rankings
Maintainers (1)
Dependencies
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- mne ^0.23.0
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- opencv-python ^4.4.0
- pandas ^1.2.4
- pyOpenBCI ^0.13
- pyserial ^3.4
- python >=3.7.1,<4.0
- requests ^2.24.0
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- actions/checkout v2 composite
- actions/setup-python v2 composite
- codecov/codecov-action v2 composite