helayo

helayo: Reconstructing Sanskrit texts from manuscript witnesses - Published in JOSS (2022)

https://github.com/chchch/sanskrit-alignment

Science Score: 95.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 6 DOI reference(s) in README and JOSS metadata
  • Academic publication links
    Links to: joss.theoj.org
  • Committers with academic emails
    2 of 5 committers (40.0%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
    Published in Journal of Open Source Software

Keywords

haskell javascript philology phylogeny sequence-alignment

Keywords from Contributors

mesh

Scientific Fields

Artificial Intelligence and Machine Learning Computer Science - 83% confidence
Last synced: 4 months ago · JSON representation

Repository

Sequence alignment and textual reconstruction for Sanskrit texts

Basic Info
  • Host: GitHub
  • Owner: chchch
  • License: bsd-3-clause
  • Language: JavaScript
  • Default Branch: master
  • Homepage:
  • Size: 45.3 MB
Statistics
  • Stars: 11
  • Watchers: 3
  • Forks: 3
  • Open Issues: 2
  • Releases: 6
Topics
haskell javascript philology phylogeny sequence-alignment
Created over 5 years ago · Last pushed 11 months ago
Metadata Files
Readme Contributing License

README.md

Tools for aligning Sanskrit texts

DOI helayo build & test matrix-editor test

This repository contains helayo, a program for aligning/collating Sanskrit texts, and matrix-editor, a web-based interface for editing those alignments and producing tree-based textual reconstructions.

See the docs at https://chchch.github.io/sanskrit-alignment/docs/ for more information.

directories

  • csv2mafft/ — tools for working with MAFFT
  • docs/ — the location of the tutorial
  • example/ — the example files used in the tutorial
    • example/fastt/ — FASTT files exported from saktumiva.org
    • example/xml/ — those files aligned, which can be opened in the matrix-editor
    • example/trees/ ― phylogenetic trees produced from the alignments
  • helayo/ — the alignment program
    • helayo/dist/ ― binaries for MacOS, Ubuntu Linux, and Windows
  • matrix-editor/ — an interface to view/edit alignments, export them to be used with phylogenetic tree-building software, and reconstruct texts based on those trees; this can accessed online

This repository has been published in the Journal for Open Source Software:

Li, C., (2022). helayo: Reconstructing Sanskrit texts from manuscript witnesses. Journal of Open Source Software, 7(71), 4022, https://doi.org/10.21105/joss.04022

Owner

  • Login: chchch
  • Kind: user

JOSS Publication

helayo: Reconstructing Sanskrit texts from manuscript witnesses
Published
March 22, 2022
Volume 7, Issue 71, Page 4022
Authors
Charles Li ORCID
Centre nationale de la recherche scientifique, École des hautes études en sciences sociales
Editor
Gabriela Alessio Robles ORCID
Tags
Javascript critical editing philology Sanskrit sequence alignment

GitHub Events

Total
  • Watch event: 3
  • Push event: 5
  • Pull request event: 2
  • Create event: 2
Last Year
  • Watch event: 3
  • Push event: 5
  • Pull request event: 2
  • Create event: 2

Committers

Last synced: 5 months ago

All Time
  • Total Commits: 287
  • Total Committers: 5
  • Avg Commits per committer: 57.4
  • Development Distribution Score (DDS): 0.24
Past Year
  • Commits: 14
  • Committers: 2
  • Avg Commits per committer: 7.0
  • Development Distribution Score (DDS): 0.286
Top Committers
Name Email Commits
chchch c****2@c****k 218
chchch c****i@c****r 42
chchch c****h 22
dependabot[bot] 4****] 4
Bruno P. Kinoshita k****w 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 4 months ago

All Time
  • Total issues: 4
  • Total pull requests: 21
  • Average time to close issues: 19 days
  • Average time to close pull requests: 17 days
  • Total issue authors: 2
  • Total pull request authors: 3
  • Average comments per issue: 2.0
  • Average comments per pull request: 1.05
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 18
Past Year
  • Issues: 0
  • Pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: 1 minute
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.17
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 6
Top Authors
Issue Authors
  • kinow (3)
  • xiaohk (1)
Pull Request Authors
  • dependabot[bot] (23)
  • kinow (2)
  • galessiorob (1)
Top Labels
Issue Labels
Pull Request Labels
dependencies (23)

Dependencies

helayo/helayo.cabal hackage
  • MissingH *
  • align-affine *
  • array *
  • base >=4.7 && <5
  • containers *
  • deepseq *
  • fasta *
  • helayo *
  • hxt-unicode *
  • matrix *
  • parallel *
  • parsec *
  • random *
  • regex-pcre-builtin *
  • split *
  • tasty *
  • tasty-hunit *
  • transformers *
  • vector *
  • MissingH * test
  • align-affine * test
  • array * test
  • base >=4.7 && <5 test
  • containers * test
  • deepseq * test
  • fasta * test
  • helayo * test
  • hxt-unicode * test
  • matrix * test
  • parallel * test
  • parsec * test
  • random * test
  • regex-pcre-builtin * test
  • split * test
  • tasty * test
  • tasty-hunit * test
  • transformers * test
  • vector * test
matrix-editor/src/package.json npm
  • @snowpack/plugin-webpack ^3.0.0 development
  • fs ^0.0.2 development
  • jsdom ^20.0.0 development
  • saxon-js ^2.4.0 development
  • snowpack ^3.8.8 development
  • snowpack-plugin-unicode ^1.0.0 development
  • hypher ^0.2.5
  • raphael ^2.3.0
matrix-editor/src/yarn.lock npm
  • 736 dependencies
.github/workflows/build.yml actions
  • actions/cache v2.1.3 composite
  • actions/checkout v2 composite
  • haskell/actions/setup v1 composite
  • stefanzweifel/git-auto-commit-action v4 composite
.github/workflows/jstest.yml actions
  • actions/checkout v2 composite
  • actions/setup-node v2 composite
tei-to-fastt/package.json npm
  • fs ^0.0.1-security
  • jsdom ^20.0.2
  • path ^0.12.7
  • yargs ^17.6.2