https://github.com/boom-lab/crocolaketools-public
Science Score: 26.0%
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○Scientific vocabulary similarity
Low similarity (11.7%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: boom-lab
- License: gpl-3.0
- Language: Python
- Default Branch: main
- Size: 2.73 MB
Statistics
- Stars: 1
- Watchers: 2
- Forks: 4
- Open Issues: 4
- Releases: 0
Metadata Files
README.md
CrocoLakeTools
CrocoLakeTools is a Python package containing modules to interface with CrocoLake -- a database of oceanographic observations that is developed and maintained in the framework of the NSF-sponsored project CROCODILE (CESM Regional Ocean and Carbon cOnfigurator with Data assimilation and Embedding).
It is composed of two submodules, downloader and converter, which retrieve the most recent version of some ocean observations datasets and convert them to CrocoLake's format. It share some utilities with CrocoLakeLoader, the package to load and manipulate CrocoLake's data, and it is included as a submodule.
Table of Contents
Installation
Clone the repository locally and, on your terminal, run:
pip install ./crocolakeloader/
pip install .
If you encounter some dependency issues, try running
pip install ./crocolakeloader/
pip install . -c constraints.txt
converter
The converter module contains several classes to convert from one source to the parquet format; they all inherit from the Conveter() class and follow the same workflow, but each step can be highly specialized depending on the observations source. For GLODAP and Spray Gliders data, it requires that the machine hosts the original sources. The examples in the scripts folder to show how to set up and run an existing converter.
downloader
The downloader module downloads the observations sources to convert. It currently contains tools to download Argo's GDAC only.
Available sources
As of this release, CrocoLake includes all the Argo physical and biogeochemical data present in the GDAC, GLODAP's database, and QC-ed observations from Spray Gliders.
We are always working on including new sources, and the next candidates are the North Atlantic CPR Survey and the Oleander project.
If you are interested in a particular dataset to be added, get in touch!
Owner
- Name: Woods Hole Oceanographic Institution Biogeochemical Ocean Observing and Modeling Lab
- Login: boom-lab
- Kind: organization
- Website: boomlab.whoi.edu
- Repositories: 3
- Profile: https://github.com/boom-lab
GitHub Events
Total
- Create event: 6
- Issues event: 20
- Watch event: 1
- Delete event: 2
- Issue comment event: 47
- Member event: 1
- Push event: 58
- Pull request review event: 9
- Pull request review comment event: 5
- Pull request event: 24
- Fork event: 3
Last Year
- Create event: 6
- Issues event: 20
- Watch event: 1
- Delete event: 2
- Issue comment event: 47
- Member event: 1
- Push event: 58
- Pull request review event: 9
- Pull request review comment event: 5
- Pull request event: 24
- Fork event: 3
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 1
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- enrico-mi (9)
- david11133 (2)
- SIDDHARTH1-1CHAUHAN (1)
Pull Request Authors
- enrico-mi (8)
- david11133 (4)
- gaelforget (2)