https://github.com/breeding-insight/lettuce_dartag_marker_panel_paper
This repository contains the scripts used to generate different results, files and figures used in the manuscript.
https://github.com/breeding-insight/lettuce_dartag_marker_panel_paper
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.7%) to scientific vocabulary
Repository
This repository contains the scripts used to generate different results, files and figures used in the manuscript.
Basic Info
- Host: GitHub
- Owner: Breeding-Insight
- Language: R
- Default Branch: main
- Size: 32.2 KB
Statistics
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
Lettuce DArTag Marker Panel paper
This repository contains the scripts used to generate different results, files and figures used in the manuscript.
Markerpanelcreation
This directory contains R scripts for the 3K lettuce DArTag panel creation.
Realignmentvariantcalling
This directory contains bash pipelines for sequence alignment, variance calling and preliminary SNP filtering
Validation_analysis
This directory contains R scripts for genotype data filtering, genotype data comparison and linkage map construction.
Owner
- Name: Breeding Insight
- Login: Breeding-Insight
- Kind: organization
- Website: https://breedinginsight.org
- Repositories: 12
- Profile: https://github.com/Breeding-Insight
Combining genomics and informatics to accelerate genetic gains.
GitHub Events
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- Member event: 2
- Push event: 15
- Create event: 2
Last Year
- Member event: 2
- Push event: 15
- Create event: 2