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Open Source Science

https://github.com/broadinstitute/2024-09-20-unix-shell-lesson

Based on https://github.com/datacarpentry/shell-genomics/

https://github.com/broadinstitute/2024-09-20-unix-shell-lesson

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 1 committers (100.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.9%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Based on https://github.com/datacarpentry/shell-genomics/

Basic Info
Statistics
  • Stars: 0
  • Watchers: 4
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Created almost 2 years ago · Last pushed over 1 year ago
Metadata Files
Readme Contributing License Code of conduct

README.md

Computing Basics series: Unix Shell

Lesson GitHub repository

This lesson is based on Data Carpentry's Introduction to the Command Line for Genomics and Library Carpentry's The Unix Shell. Please see https://jlchang.github.io/2024-06-21-unix-shell-lesson/ for a rendered version of this material.

Maintainers for Computing Basics series: Unix Shell

  • Jean Chang
  • Amelia Hall
  • Sohpie Webster

Code of Conduct

All participants should agree to abide by the Broad Institute Standards of Conduct

License

The instructional material in this repository is made available under the Creative Commons Attribution license.

Citation

Jean Chang, Amelia Hall, Sohpie Webster, et al.

Computing Basics series: Unix Shell.

Checking and Previewing the Lesson

To check and preview a lesson locally, see the lesson infrastructure documentation.

Owner

  • Name: Broad Institute
  • Login: broadinstitute
  • Kind: organization
  • Location: Cambridge, MA

Broad Institute of MIT and Harvard

GitHub Events

Total
  • Delete event: 1
  • Issue comment event: 2
  • Push event: 44
  • Pull request event: 3
  • Create event: 3
Last Year
  • Delete event: 1
  • Issue comment event: 2
  • Push event: 44
  • Pull request event: 3
  • Create event: 3

Committers

Last synced: 12 months ago

All Time
  • Total Commits: 21
  • Total Committers: 1
  • Avg Commits per committer: 21.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 21
  • Committers: 1
  • Avg Commits per committer: 21.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Jean Chang j****g@b****g 21
Committer Domains (Top 20 + Academic)
broadinstitute.org: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 0
  • Total pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: about 2 hours
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.83
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: about 2 hours
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.83
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • jlchang (8)
Top Labels
Issue Labels
Pull Request Labels
type: template and tools (2) type: package cache (2)

Dependencies

.github/workflows/pr-close-signal.yaml actions
  • actions/upload-artifact v3 composite
.github/workflows/pr-comment.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/check-valid-pr main composite
  • carpentries/actions/comment-diff main composite
  • carpentries/actions/download-workflow-artifact main composite
.github/workflows/pr-post-remove-branch.yaml actions
  • carpentries/actions/download-workflow-artifact main composite
  • carpentries/actions/remove-branch main composite
.github/workflows/pr-preflight.yaml actions
  • carpentries/actions/check-valid-pr main composite
  • carpentries/actions/comment-diff main composite
.github/workflows/pr-receive.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v3 composite
  • carpentries/actions/check-valid-pr main composite
  • carpentries/actions/setup-lesson-deps main composite
  • carpentries/actions/setup-sandpaper main composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/sandpaper-main.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/setup-lesson-deps main composite
  • carpentries/actions/setup-sandpaper main composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/update-cache.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/check-valid-credentials main composite
  • carpentries/actions/update-lockfile main composite
  • carpentries/create-pull-request main composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/update-workflows.yaml actions
  • actions/checkout v3 composite
  • carpentries/actions/check-valid-credentials main composite
  • carpentries/actions/update-workflows main composite
  • carpentries/create-pull-request main composite