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https://github.com/broadinstitute/molecular-data-provider

Molecular Data Provider

https://github.com/broadinstitute/molecular-data-provider

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (0.3%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Molecular Data Provider

Basic Info
  • Host: GitHub
  • Owner: broadinstitute
  • License: mit
  • Language: Python
  • Default Branch: master
  • Size: 4.78 MB
Statistics
  • Stars: 10
  • Watchers: 9
  • Forks: 8
  • Open Issues: 8
  • Releases: 0
Created over 6 years ago · Last pushed 12 months ago
Metadata Files
Readme License

README.md

molecular-data-provider

Molecular Data Provider

Owner

  • Name: Broad Institute
  • Login: broadinstitute
  • Kind: organization
  • Location: Cambridge, MA

Broad Institute of MIT and Harvard

GitHub Events

Total
  • Delete event: 4
  • Member event: 1
  • Push event: 73
  • Pull request event: 10
  • Create event: 19
Last Year
  • Delete event: 4
  • Member event: 1
  • Push event: 73
  • Pull request event: 10
  • Create event: 19

Dependencies

reasonerAPI/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
reasonerAPI/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
test/requirements.txt pypi
  • behave ==1.2.6
  • jsonpath-rw ==1.4.0
  • requests >=2.22.0
transformers/chebi/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/chebi/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/chembank/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/chembank/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/chembl/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/chembl/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/cmap/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/cmap/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/ctrp/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/ctrp/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/depmap/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/depmap/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/dgidb/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/dgidb/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/drugbank/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/drugbank/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/drugcentral/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/drugcentral/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/gtopdb/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/gtopdb/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/hmdb/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/hmdb/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/inxight_drugs/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/inxight_drugs/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/msigdb/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • scipy *
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/msigdb/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/node-normalizer/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/node-normalizer/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/pharos/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/pharos/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/pubchem/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/pubchem/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/rephub/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/rephub/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/rxnorm/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/rxnorm/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
transformers/stitch/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/stitch/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3
  • flask_testing ==0.6.1
  • nose >=1.3.7
  • pluggy >=0.3.1
  • py >=1.4.31
  • randomize >=0.13
Dockerfiles/molepro-db/Dockerfile docker
  • python 3-alpine build
.github/workflows/ci-bdd_test.yml actions
  • actions/checkout v2 composite
.github/workflows/main.yml actions
  • actions/checkout v2 composite
.github/workflows/prod-bdd_test.yml actions
  • actions/checkout v2 composite
.github/workflows/prod-bdd_trapi_test.yml actions
  • actions/checkout v2 composite
.github/workflows/test-bdd.yml actions
  • actions/checkout v2 composite
Dockerfiles/bigg-models/Dockerfile docker
  • python 3-alpine build
Dockerfiles/bindingdb/Dockerfile docker
  • python 3-alpine build
Dockerfiles/chebi/Dockerfile docker
  • python 3-alpine build
Dockerfiles/chembank/Dockerfile docker
  • python 3-alpine build
Dockerfiles/chembl/Dockerfile docker
  • python 3-alpine build
Dockerfiles/cmap/Dockerfile docker
  • python 3-alpine build
Dockerfiles/ctd/Dockerfile docker
  • python 3-alpine build
Dockerfiles/ctrp/Dockerfile docker
  • python 3-alpine build
Dockerfiles/depmap/Dockerfile docker
  • python 3-alpine build
Dockerfiles/dgidb/Dockerfile docker
  • python 3-alpine build
Dockerfiles/drugbank/Dockerfile docker
  • python 3-alpine build
Dockerfiles/drugcentral/Dockerfile docker
  • python 3-alpine build
Dockerfiles/gtopdb/Dockerfile docker
  • python 3-alpine build
Dockerfiles/hmdb/Dockerfile docker
  • python 3-alpine build
Dockerfiles/inxight_drugs/Dockerfile docker
  • python 3-alpine build
Dockerfiles/molepro-api/Dockerfile docker
  • adoptopenjdk/openjdk8 latest build
  • bpatters/docker-java8-sbt latest build
Dockerfiles/msigdb/Dockerfile docker
  • python 3.8.1-alpine3.11 build
Dockerfiles/node-normalizer/Dockerfile docker
  • python 3-alpine build
Dockerfiles/pharos/Dockerfile docker
  • python 3-alpine build
Dockerfiles/pubchem/Dockerfile docker
  • python 3-alpine build
Dockerfiles/rephub/Dockerfile docker
  • python 3-alpine build
Dockerfiles/rxnorm/Dockerfile docker
  • python 3-alpine build
Dockerfiles/stitch/Dockerfile docker
  • python 3-alpine build
Dockerfiles/string/Dockerfile docker
  • python 3-alpine build
reasonerAPI/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/bindingdb/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/chebi/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/chembank/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/ctd/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/depmap/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/drugcentral/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/molepro-db/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/node-normalizer/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/sider/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/string/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/bindingdb/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • gunicorn >=20.1.0
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/bindingdb/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3 test
  • flask_testing ==0.6.1 test
  • nose >=1.3.7 test
  • pluggy >=0.3.1 test
  • py >=1.4.31 test
  • randomize >=0.13 test
transformers/ctd/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • gunicorn >=20.1.0
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/ctd/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3 test
  • flask_testing ==0.6.1 test
  • nose >=1.3.7 test
  • pluggy >=0.3.1 test
  • py >=1.4.31 test
  • randomize >=0.13 test
transformers/molepro-db/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • gunicorn >=20.1.0
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/molepro-db/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3 test
  • flask_testing ==0.6.1 test
  • nose >=1.3.7 test
  • pluggy >=0.3.1 test
  • py >=1.4.31 test
  • randomize >=0.13 test
transformers/sider/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/sider/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3 test
  • flask_testing ==0.6.1 test
  • nose >=1.3.7 test
  • pluggy >=0.3.1 test
  • py >=1.4.31 test
  • randomize >=0.13 test
transformers/string/python-flask-server/requirements.txt pypi
  • connexion >=2.0.2
  • gunicorn >=20.1.0
  • python_dateutil >=2.6.0
  • setuptools >=21.0.0
  • swagger-ui-bundle >=0.0.2
transformers/string/python-flask-server/test-requirements.txt pypi
  • coverage >=4.0.3 test
  • flask_testing ==0.6.1 test
  • nose >=1.3.7 test
  • pluggy >=0.3.1 test
  • py >=1.4.31 test
  • randomize >=0.13 test
Dockerfiles/hgnc/Dockerfile docker
  • python 3-alpine build
Dockerfiles/probe-miner/Dockerfile docker
  • python 3-alpine build
Dockerfiles/sider/Dockerfile docker
  • python 3-alpine build
Dockerfiles/trapi/Dockerfile docker
  • python 3-alpine build
transformers/hgnc/python-flask-server/Dockerfile docker
  • python 3-alpine build
transformers/probe-miner/python-flask-server/Dockerfile docker
  • python 3-alpine build
reasonerAPI/python-flask-server/setup.py pypi
transformers/bindingdb/python-flask-server/setup.py pypi