https://github.com/broadinstitute/alicia
Key/value store for Firecloud
Science Score: 23.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
1 of 2 committers (50.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (9.1%) to scientific vocabulary
Repository
Key/value store for Firecloud
Basic Info
- Host: GitHub
- Owner: broadinstitute
- Language: Python
- Default Branch: master
- Size: 23.4 KB
Statistics
- Stars: 0
- Watchers: 49
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
Alicia
Key/value store service for Firecloud. Alicia is a Google Endpoints application written in Python 2.7.
Dependencies
In order to run tests or run the local development app server, you need to install Python 2.7, Pip, and Google Cloud SDK.
Running Locally
Virtualenv
Virtualenv is a tool that helps you manage multiple Python versions and your project dependencies. We recommend you setup Virtualenv for development and testing of Bond.
- Verify that you have Python 2.7 installed:
python --version(Note: The name of your Python 2.7 command may be something different like python2 if you have multiple versions of Python installed) - Install virtualenv:
pip install virtualenv cdto the Alicia root directory- Set up virtualenv for Alicia:
virtualenv -p python env(Note: Ensure that you pass the correct Python 2.7 executable to the -p parameter) - Activate virtualenv:
source env/bin/activate - Install project dependencies:
pip install -r requirements.txt -t lib --ignore-installedYou may now run tests or run the application server normally.
When you are ready to exit or deactivate your Alicia virtualenv, just type the command deactivate on your command line.
Starting the Server
The first time you run the server, you will need to run the following command to generate the OpenAPI config:
aidl
python lib/endpoints/endpointscfg.py get_openapi_spec main.AliciaAPI --hostname broad-alicia-dev.appspot.com
Then to start the server, run:
dev_appserver.py ./app.yaml
Owner
- Name: Broad Institute
- Login: broadinstitute
- Kind: organization
- Location: Cambridge, MA
- Website: http://www.broadinstitute.org/
- Twitter: broadinstitute
- Repositories: 1,083
- Profile: https://github.com/broadinstitute
Broad Institute of MIT and Harvard
GitHub Events
Total
Last Year
Committers
Last synced: about 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Jackie Roberti | j****3@g****m | 14 |
| Greg Polumbo | g****o@b****g | 10 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0