https://github.com/brody-lab/brunton_dataset
Science Score: 26.0%
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Low similarity (7.1%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: Brody-Lab
- Default Branch: main
- Size: 171 MB
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Metadata Files
README.md
Data Set from Brunton, Botvinick, and Brody Science 2013
This repository contains the rat behavioral data set used in Bingni W. Brunton, Matthew M. Botvinick, and Carlos D. Brody. 2013. Rats and Humans Can Optimally Accumulate Evidence for Decision-Making. Science 340 (6128): 9598.
These data are released by the authors, to be used by others, under the CC-BY-NC-4.0 license.
Each file corresponds to data from 1 rat (19 rats total). Each file is named "chrono_{ratname}_rawdata.mat" and is a Matlab data file. (Note that such files can also be read into Python or Julia.)
Loading a file into a variable will instantiate a structure with the following fields:
- ratname -- Identifies an animal subject
- daterange -- The date range over which the data was gathered
- rawdata -- The actual data
- total_trials -- Number of behavioral trials in the data set
- avgdata -- Data averaged within trial conditions.
Most of the data is in the "rawdata" field, which in turn is a structure with a number of fields, each of which contains a total_trials-long vector. The i'th entry corresponds to the i'th trial. The fields are the following:
- stim_delay -- silent period, in seconds, between subject poking its nose into the center poke, and the stimulus starting to play
- T -- duration, in seconds, over which auditory clicks were played
- leftbups -- times, relative to the start of the stimulus period, at which clicks from the left speaker were played
- rightbups -- times, relative to the start of the stimulus period, at which clicks from the right speaker were played
- pokedR -- Boolean indicating whether the subject, as its response, decided to poke into the Right poke at the end of the stimulus (true), or poked into the left poke (false)
- hit -- Boolean indicating whether the subject's response poke was correct (rewarded) or incorrect (not rewarded)
- Delta -- total number of Right minus Left clicks played
- gamma -- logarithm of the ratio of the Poisson rate used to generate Right versus Left clicks
Owner
- Name: Brody-Lab
- Login: Brody-Lab
- Kind: organization
- Repositories: 12
- Profile: https://github.com/Brody-Lab
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