Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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✓Academic publication links
Links to: biorxiv.org, nature.com -
○Academic email domains
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.4%) to scientific vocabulary
Last synced: 10 months ago
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Repository
JRCLUST
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Fork of JaneliaSciComp/JRCLUST
Created about 7 years ago
· Last pushed over 1 year ago
https://github.com/Brody-Lab/JRCLUST/blob/main/
# JRCLUST
## Note
**JRCLUST is no longer being actively maintained.**
If you still want to use JRCLUST, we recommend using the [latest release](https://github.com/JaneliaSciComp/JRCLUST/releases/tag/v4.1.0) or cloning from `main`, rather than `master`.
JRCLUST is a scalable and customizable package for spike sorting on [high-density silicon probes](https://www.nature.com/articles/nature24636).
It is written in MATLAB and CUDA.
JRCLUST was originally developed by [James Jun](https://www.simonsfoundation.org/team/james-jun/).
## Installing JRCLUST
If you'd like to
test the latest development code, you can [clone the
repository](https://help.github.com/articles/cloning-a-repository/) to
your computer. If you want to stay on a release, head to the [releases
page](https://github.com/JaneliaSciComp/JRCLUST/releases) and download
the latest release.
Run the following command in MATLAB (you may want to add it to your [startup
script](https://www.mathworks.com/help/matlab/ref/startup.html)):
```matlab
addpath('/path/to/JRCLUST');
```
You may also need to recompile your CUDA codes if you're not on Windows.
Do this with
```matlab
jrclust.CUDA.compileCUDA();
```
## Questions?
Read the documentation [here](https://jrclust.readthedocs.io/en/latest/index.html) and the original bioRxiv paper [here](https://www.biorxiv.org/content/early/2017/01/30/101030).
Still have questions?
Visit our [Gitter community](https://gitter.im/JRCLUST/community) and ask!
Owner
- Name: Brody-Lab
- Login: Brody-Lab
- Kind: organization
- Repositories: 12
- Profile: https://github.com/Brody-Lab
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