https://github.com/brunomioto/atlanticr

Provides data from ATLANTIC, a series of Ecology articles on Atlantic Forest biodiversity data

https://github.com/brunomioto/atlanticr

Repository

Provides data from ATLANTIC, a series of Ecology articles on Atlantic Forest biodiversity data

https://github.com/brunomioto/atlanticr/blob/main/

# atlanticr 

The tropical and subtropical forests along the coast and interior of
South America used to have one of the largest forests in the world  the
Atlantic Forest  with more than 1.6 million km spanning Brazil,
Argentina, and Paraguay. The
[ATLANTIC](https://esajournals.onlinelibrary.wiley.com/doi/toc/10.1002/(ISSN)1939-9170.AtlanticPapers)
includes a series of Data Papers about the community composition,
distribution of plants and animals, and environmental characteristics
from the Atlantic Forest. These papers are a fundamental tool for both
scientists and policy makers.

The goal of this package is to provide data from the ATLANTIC, a series
of data papers by Ecology on biodiversity data from the Atlantic Forest.
Currently, there are 17 data sets: nine about vertebrates, two about
vertebrate traits, two about invertebrates, three about interactions
animal-plant, one about plant, and one about spatial data.

## Installation

You can install the development version of `atlanticr` from GitHub with:

``` r
# install.packages("pak")
pak::pkg_install("mauriciovancine/atlanticr")
```

## Datasets

Dataset currently included in the package are summarized below; see
individual Articles for data and source details.

**Vertebrates**

- [`atlantic_amphibians`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_amphibians.html)
  :frog: ATLANTIC AMPHIBIANS: a data set of amphibian communities from
  the Atlantic Forests of South America
- [`atlantic_bats`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_bats.html)
  :bat: ATLANTIC BATS: a data set of bat communities from the Atlantic
  Forests of South America
- [`atlantic_birds`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_birds.html)
  :parrot: ATLANTIC BIRDS: a data set of bird species from the Brazilian
  Atlantic Forest
- [`atlantic_camtraps`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_camtraps.html)
  :camera_flash: ATLANTIC-CAMTRAPS: a dataset of medium and large
  terrestrial mammal communities in the Atlantic Forest of South America
- [`atlantic_mammals`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_mammals.html)
  :cat: ATLANTIC MAMMALS: a data set of assemblages of medium- and
  large-sized mammals of the Atlantic Forest of South America
- [`atlantic_nonvolant_mammals`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_nonvolant_mammals.html)
  :mouse: Non-volant mammals from the Upper Paran River Basin: a data
  set from a critical region for conservation in Brazil
- [`atlantic_primates`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_primates.html)
  :monkey: ATLANTIC-PRIMATES: a dataset of communities and occurrences
  of primates in the Atlantic Forests of South America
- [`atlantic_small_mammal`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_small_mammal.html)
  :mouse: Atlantic small-mammal: a dataset of communities of rodents and
  marsupials of the Atlantic forests of South America
- [`atlantic_small_mammal_abundance`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_small_mammal_abundance.html)
  :mouse::1234: Abundance of small mammals in the Atlantic Forest
  (ASMAF): a data set for analyzing tropical community patterns

**Vertebrate traits**

- [`atlantic_bird_traits`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_bird_traits.html)
  :bird::straight_ruler: ATLANTIC BIRD TRAITS: a data set of bird
  morphological traits from the Atlantic forests of South America
- [`atlantic_mammal_traits`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_mammal_traits.html)
  :bat::straight_ruler: ATLANTIC MAMMAL TRAITS: a data set of
  morphological traits of mammals in the Atlantic Forest of South
  America

**Invertebrates**

- [`atlantic_ants`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_ants.html)
  :ant: ATLANTIC ANTS: a data set of ant communities from the Atlantic
  Forests of South America
- [`atlantic_butterflies`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_butterflies.html)
  :butterfly: Atlantic butterflies: a data set of fruit-feeding
  butterfly communities from the Atlantic forests

**Animal-plants interaction**

- [`atlantic_frugivory`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_frugivory.html)
  :bird::cherries: Atlantic frugivory: a plantfrugivore interaction
  data set for the Atlantic Forest
- [`atlantic_pollination`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_pollination.html)
  :bird::hibiscus: ATLANTIC POLLINATION: a data set of flowers and
  interaction with nectar-feeding vertebrates from the Atlantic Forest
- [`atlantic_flower_invertebrate_interactions`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_flower_invertebrate_interactions.html)
  :bee::white_flower: Atlantic flowerinvertebrate interactions: A data
  set of occurrence and frequency of floral visits

**Plants**

- [`atlantic_epiphytes`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_epiphytes.html)
  :seedling: ATLANTIC EPIPHYTES: a data set of vascular and non-vascular
  epiphyte plants and lichens from the Atlantic Forest

**Spatial**

- [`atlantic_spatial`](https://mauriciovancine.github.io/atlanticr/reference/atlantic_spatial.html)
  :earth_americas: ATLANTIC SPATIAL: a dataset of landscape,
  topographic, hydrologic and anthropogenic metrics for the Atlantic
  Forest

## How to provide feedback

The best way to provide feedback on this package is to open an
[issue](https://github.com/mauriciovancine/atlanticr/issues) and assign
the `feedback` label. Thank you! :raised_hands:

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