https://github.com/c-martinez/awesome-research-software-registries

Awesome list of Research Software Registries

https://github.com/c-martinez/awesome-research-software-registries

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Awesome list of Research Software Registries

https://github.com/c-martinez/awesome-research-software-registries/blob/main/

# Awesome Research Software Registries [![Awesome](https://awesome.re/badge.svg)](https://awesome.re)



A list of research software registries (also known as catalog, index, warehouse,
repository, hub, platform, and other terms).

We define a registry as any publicly accessible website where research software
can be registered, and that employs Search Engine Optimization such as the
addition of metadata to help promote discovery of the research software that is
published on the registry. Websites do not necessarily have to retain their own
copies of the research software itself in order to be included in the list
below.

## Contents

* [By country](#by-country)
* [By organization](#by-organization)
* [By programming language](#by-programming-language)
* [By domain](#by-domain)
* [Generic](#generic)

## By country

* [France](https://hal.archives-ouvertes.fr) - HAL is an open archive where
  authors can deposit scholarly documents from all academic fields.
* [Netherlands](https://narcis.nl) -  NARCIS aims to record all scholarly
  outputs (papers, data, as well as software) produced at Dutch institutions.

## By organization

* [caltech.edu](https://data.caltech.edu/search?page=1&size=25&ln=en&q=&cal_resource_type=software) - California
Institute of Technology overview of software packages.
* [compbiomed.eu](https://www.compbiomed.eu/services/software-hub/) - Software
  catalogue from H2020 project CompBioMed.
* [darpa.mil](https://www.darpa.mil/opencatalog) - US Defense Advanced Research
  Projects Agency (DARPA).
* [b2find.eudat.eu](http://b2find.eudat.eu/dataset?q=software) - Data and
  software discovery service based on metadata harvested from research data
  collections from EUDAT data centres and other repositories.
* [kb.nl](http://lab.kb.nl/) - Dutch Royal Library.
* [lbl.gov](https://lbl.gov) - Lawrence Berkeley National Lab.
  * [Applied Mathematics Software](https://crd.lbl.gov/software/applied-mathematics-software/)
  * [Computational Science Software](https://crd.lbl.gov/software/computational-science-software/)
  * [Computer Science Software](https://crd.lbl.gov/software/computer-science-software/)
  * [Data Science & Technology Software](https://crd.lbl.gov/software/data-science-and-technology-software/)
* [nasa.gov](https://software.nasa.gov/) - NASA software catalog.
* [ontosoft.org](https://www.ontosoft.org/portal/#list) - Software from a
  variety of disciplines, annotated and searchable using the
  [OntoSoft vocabulary](https://ontosoft.org/ontology.html) for describing
  software.
* [osti.gov/doecode](https://www.osti.gov/doecode/) - DOECODE: US Department of
  Energy code repository.
* [software.esciencecenter.nl](http://software.esciencecenter.nl) - Netherlands
  eScience Center software portfolio (powered by the
  [Research Software Directory](https://github.com/research-software-directory/research-software-directory).)
* [re3data](https://www.re3data.org/search?query=&contentTypes%5B%5D=Source%20code) - Many
  of the registries listed in the _Registry of Research Data Repositories_ also
  include software.
* [USGS](https://usgs.ontosoft.org/#list) - US Geological Survey software,
  annotated and searchable using the
  [OntoSoft vocabulary](https://ontosoft.org/ontology.html) for describing
  software.
* [4TU dataset and software registry](https://data.4tu.nl) - Registry of software and datasets for the 4 Dutch Technical Universities (TUs), namely [Delft University of Technology](https://www.tudelft.nl/en/), [Eindhoven University of Technology](https://www.tue.nl/en/), [University of Twente](https://www.utwente.nl/en/), [Wageningen University and Research](https://www.wur.nl/en.htm) and other institutions.

## By programming language

* [C, C++](https://conan.io/center/)
* [JavaScript, TypeScript](https://npmjs.com)
* [Julia](https://juliahub.com/ui/Packages)
* [MATLAB](https://mathworks.com/matlabcentral/fileexchange/)
* Python
  * [Python Package Index (PyPI)](https://pypi.org)
  * [Anaconda Cloud Gallery](https://anaconda.org/gallery)
* R
  * [CRAN](https://cran.r-project.org)
  * [rOpenSci](https://ropensci.org/packages/)
  * [Bioconductor](https://www.bioconductor.org/packages/release/BiocViews.html#___Software)
* [Ruby](https://rubygems.org)
* [Rust](https://crates.io)

## By domain

* [ascl.net](https://ascl.net) - Astrophysics Source Code Library (ASCL).
* Computational Fluid Dynamics
  * https://www.cfd-online.com/Links/soft.html
  * https://www.cfd-online.com/Links/programming.html
* [egi.eu](https://appdb.egi.eu/browse/software) - Grid Computing middleware.
* Earth Sciences
  * [coral.ontosoft.org](https://coral.ontosoft.org/#list) - Software related to
    the
    [Coral Reef Science and Cyberinfrastructure network](https://www.earthcube.org/group/crescynt-coral-reef-science-cyberinfrastructure-network),
    annotated and searchable using the [OntoSoft vocabulary](https://ontosoft.org/ontology.html)
    for describing software.
  * [csdms.ontosoft.org](https://csdms.ontosoft.org/#list) - Software related to
    the [Community Surface Dynamics Modeling System](https://en.wikipedia.org/wiki/Community_Surface_Dynamics_Modeling_System),
    annotated and searchable using the [OntoSoft vocabulary](https://ontosoft.org/ontology.html)
    for describing software.
  * [geodynamics.org](https://geodynamics.org/cig/software/) - Variety of
    software packages covering crustal dynamics, tectonics, mantle convection,
    seismology, spherical harmonics, and computational science.
  * [geospace.ontosoft.org](https://geospace.ontosoft.org/#list) - Software from
    the Geospace domain, annotated and searchable using the
    [OntoSoft vocabulary](https://ontosoft.org/ontology.html) for describing
    software.
* Humanities
  * [dighumlab.org](https://dighumlab.org/tools/) - Software tools as used in
  the humanities, such as speech analysis, tokenization, lemmatization, web
  content scraping, and more.
  * [digitalmethods.net](https://wiki.digitalmethods.net/Dmi/ToolDatabase) - Digital
  methods for research into social and political issues based on New Media.
  * [tapor.ca](http://tapor.ca/home) - Text Analysis.
* Life Sciences / Biology / Medical
  * [bio.tools](https://bio.tools) - Essential scientific and technical
  information about software tools, databases and services for bioinformatics
  and the life sciences.
  * [Bioconductor](https://www.bioconductor.org/packages/release/BiocViews.html#___Software)
  * [biii.eu](https://biii.eu) - Bioimaging.
  * [nitrc.org](https://nitrc.org) - NeuroImaging Tools & Resources Collaboratory.
  * [omics.ontosoft.org](https://omics.ontosoft.org/#list) - Software related to
    metabolomics, genomics and
    [other omics](https://en.wikipedia.org/wiki/Omics), annotated and searchable
    using the [OntoSoft vocabulary](https://ontosoft.org/ontology.html) for
    describing software.
  * [sbgrid.org](https://sbgrid.org/software/) - Structural biology softwares
  and datasets. Members of SBGrid can benefit access to all of the deposited
  softwares, e.g. PyMOL.
  * [scicrunch.org](https://scicrunch.org/browse/resourcedashboard) - A human
  curated repository with unique persistent identifiers that are widely used in
  the biomedical literature.
  * [yale.edu/modeldb](https://senselab.med.yale.edu/modeldb/) - Computational
  neuroscience models.
* Mathematics
  * [gams.nist.gov](https://gams.nist.gov/cgi-bin/serve.cgi/Packages) - A
  cross-index and virtual repository of mathematical and statistical software
  components of use in computational science and engineering.
  * [netlib.org/JackDongarra](http://www.netlib.org/utk/people/JackDongarra/la-sw.html) - Software
  for high-performance computers that's available in "open source" form on the
  web for solving problems in numerical linear algebra, specifically dense,
  sparse direct and iterative systems, and sparse iterative eigenvalue problems.
  * [swmath.org](https://swmath.org) - Mathematics.
* [mloss.org/software](https://mloss.org/software) - Machine Learning.
* [nanohub.org](https://nanohub.org/resources/tools) - Nano Technology.
* Social and Ecological Sciences
  * [comses.net](https://www.comses.net/codebases/) - Library of Computational
    models for the study of social and ecological systems.


## Generic

* [CodeOcean](https://codeocean.com) - Cloud-based computational environment to
  preserve, publish, and execute research code.
* [FigShare](https://figshare.com) - Helps academic institutions store, share
  and manage all of their research outputs, and issues persistent identifiers.
* [Software Heritage Archive](https://www.softwareheritage.org)
* [Zenodo](https://zenodo.org) - Online library where you can deposit almost
  any kind of digital artefact and get a persistent identifier.
* [Internet Archive](https://archive.org/details/software) - The Internet
  Archive Software Collection is the largest vintage and historical software
  library in the world.

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