Data

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Indexes

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Experiments

Open Source Science

https://github.com/cadaei-yuvxvs/openmnd

https://github.com/cadaei-yuvxvs/openmnd

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.0%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: Cadaei-Yuvxvs
  • License: mit
  • Language: Python
  • Default Branch: main
  • Size: 11.7 KB
Statistics
  • Stars: 0
  • Watchers: 0
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created about 1 year ago · Last pushed about 1 year ago
Metadata Files
Readme License

README.md

# OpenMND: An MND Research Intelligence Platform

Accelerating MND research AI-platform for analysing Motor Neuron Disease research trends and insights.

Features

  • Real-time research paper analysis
  • AI-powered summarisation and theme extraction
  • Interactive data visualisations
  • Modern web interface

Tech Stack

  • Backend: Python, Fast API
  • Frontend: React, TypeScript
  • Database: PostgreSQL, Elasticsearch
  • ML: scikit-learn, transformers, spaCy
  • Cloud: AWS

Development Status

🚧 Currently in development - following structured development phases

Owner

  • Name: Jeryn
  • Login: Cadaei-Yuvxvs
  • Kind: user
  • Location: Brisbane, Aus

Discovering patterns in biological big data, one line of code at a time. she/her

GitHub Events

Total
  • Push event: 5
  • Create event: 2
Last Year
  • Push event: 5
  • Create event: 2

Dependencies

docker-compose.yml docker
  • docker.elastic.co/elasticsearch/elasticsearch 8.11.0
  • postgres 15
  • redis 7-alpine
backend/requirements.txt pypi
  • alembic ==1.12.1
  • beautifulsoup4 ==4.12.2
  • boto3 ==1.34.0
  • celery ==5.3.4
  • elasticsearch ==8.11.0
  • fastapi ==0.104.1
  • httpx ==0.25.2
  • numpy ==1.25.2
  • pandas ==2.1.3
  • passlib ==1.7.4
  • psycopg2-binary ==2.9.9
  • pydantic ==2.5.0
  • pydantic-settings ==2.1.0
  • pytest ==7.4.3
  • python-dotenv ==1.0.0
  • python-jose ==3.3.0
  • python-multipart ==0.0.6
  • redis ==5.0.1
  • requests ==2.31.0
  • scikit-learn ==1.3.2
  • spacy ==3.7.2
  • sqlalchemy ==2.0.23
  • torch ==2.1.1
  • transformers ==4.35.2
  • uvicorn ==0.24.0