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https://github.com/calebweinreb/top-bottom-moseq

https://github.com/calebweinreb/top-bottom-moseq

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.4%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: calebweinreb
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 58.7 MB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Created over 3 years ago · Last pushed over 3 years ago
Metadata Files
Readme

README.md

top-bottom-moseq

Installation

Install Anaconda or Miniconda. Create and activate an environment called top_bottom_moseq with python=3.7: conda create -n top_bottom_moseq python=3.7 conda activate top_bottom_moseq

Install opencv and jax conda install -c conda-forge opencv pip install --upgrade "jax[cuda]==0.3.21" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html

Clone or download top-bottom-moseq and pip install: git clone https://github.com/calebweinreb/top-bottom-moseq.git pip install -e top-bottom-moseq

Clone or download keypointMoseq and pip install: git clone https://github.com/calebweinreb/keypointMoSeq.git pip install -e keypoint_moseq

Make the new environment accessible in jupyter python -m ipykernel install --user --name=top_bottom_moseq

Owner

  • Name: Caleb Weinreb
  • Login: calebweinreb
  • Kind: user

GitHub Events

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Last Year

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Last synced: over 1 year ago

All Time
  • Total issues: 0
  • Total pull requests: 8
  • Average time to close issues: N/A
  • Average time to close pull requests: 10 days
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 6
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
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Top Authors
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  • jonahpearl (6)
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Dependencies

setup.py pypi
  • av *
  • h5py *
  • imageio *
  • imageio-ffmpeg *
  • ipykernel *
  • joblib *
  • kornia *
  • matplotlib *
  • numpy *
  • open3d *
  • scikit-learn *
  • scipy *
  • segmentation_models_pytorch *
  • torch *
  • torchinfo *
  • torchplot *
  • torchvision *
  • tqdm *