Recent Releases of splitp
splitp - Faster subflats and squangles functions
This version of SplitP was used for simulations detailed in the paper Evaluation of the relative performance of the subflattenings method for phylogenetic inference
- Python
Published by js51 almost 4 years ago
splitp - Sparse matrices and Squangles
Trees with more than 9 taxa will be feasible now, thanks to sparse matrices and signed sums.
Use sparse_flattening and sparse_subflattening functions for more than 9 taxa.
Splits are now written as two strings in base (m+n) separated by |.
For example, 01234567|89ABCDEF
Squangles are also implemented for the purpose of inferring quartet trees.
- Python
Published by js51 about 5 years ago
splitp - Final release before new tree implementation
The final release before the tree implementation in SplitP is changed to use networkx.
This release should be used to run the code used for the results in my thesis (in the 'examples' folder)
- Python
Published by js51 about 6 years ago