eggla

Early Growth Genetics Longitudinal Analysis.

https://github.com/mcanouil/eggla

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Early Growth Genetics Longitudinal Analysis.

README.Rmd

---
output: github_document
---



# EGG Longitudinal Analysis 


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Tools for longitudinal analysis within the [EGG (Early Growth Genetics) Consortium](http://egg-consortium.org/).

## Installation

* Install [`pak`](https://pak.r-lib.org/)

  ```r
  temp_library <- file.path(".", "R")
  dir.create(temp_library, recursive = TRUE)
  .libPaths(temp_library)
  utils::install.packages(
    pkgs = "pak",
    lib = temp_library,
    repos = sprintf(
      "https://r-lib.github.io/p/pak/stable/%s/%s/%s",
      .Platform[["pkgType"]], R.Version()[["os"]], R.Version()[["arch"]]
    )
  )
  ```

* Install `eggla` and its dependencies

  ```r
  library(pak)
  VERSION <- "latest"
  utils::download.file(
    url = sprintf(
      "https://raw.githubusercontent.com/mcanouil/eggla/%s/.github/.devcontainer/eggla/R/pkg.lock",
      VERSION
    ),
    destfile = "pkg.lock"
  )
  lockfile_install(lockfile = "pkg.lock", lib = temp_library)
  pkg_install(sprintf("mcanouil/eggla@%s", VERSION), lib = temp_library, upgrade = FALSE, dependencies = FALSE)
  ```

## Docker Images

- `docker pull ghcr.io/mcanouil/eggla:devel`.
- `docker pull ghcr.io/mcanouil/eggla:latest`.

## License

MIT © [Mickaël Canouil](https://mickael.canouil.fr/), Nicole Warrington, Kimberley Burrows, and Anni Heiskala.

## Code of Conduct

Please note that the `eggla` project is released with a [Contributor Code of Conduct](https://contributor-covenant.org/version/2/0/CODE_OF_CONDUCT.html).  
By contributing to this project, you agree to abide by its terms.

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