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https://github.com/carlos-alberto-silva/analyzeskeleton

ImageJ/Fiji plugin to analyze 2D and 3D skeleton images

https://github.com/carlos-alberto-silva/analyzeskeleton

Science Score: 20.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ✓
    Academic publication links
    Links to: wiley.com
  • ✓
    Committers with academic emails
    5 of 13 committers (38.5%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (3.7%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

ImageJ/Fiji plugin to analyze 2D and 3D skeleton images

Basic Info
Statistics
  • Stars: 0
  • Watchers: 0
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Fork of fiji/AnalyzeSkeleton
Created about 4 years ago · Last pushed about 4 years ago
Metadata Files
Readme License

README.md

AnalyzeSkeleton

This plugin tags all pixel/voxels in a skeleton image and then counts all its junctions, triple and quadruple points and branches, and measures their average and maximum length. The tags are shown in a new window displaying every tag in a different color. You can find it under Plugins>Skeleton>Analyze Skeleton (2D/3D).

For further details, please see the: - documentation http://fiji.sc/AnalyzeSkeleton - publication: http://www3.interscience.wiley.com/journal/123322233/abstract

Owner

  • Name: Carlos Alberto Silva
  • Login: carlos-alberto-silva
  • Kind: user
  • Company: University of Florida

GitHub Events

Total
Last Year

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 242
  • Total Committers: 13
  • Avg Commits per committer: 18.615
  • Development Distribution Score (DDS): 0.62
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Ignacio Arganda-Carreras i****a@g****m 92
Richard Domander r****r@r****k 55
Curtis Rueden c****n@w****u 53
Johannes Schindelin j****n@g****e 13
Tiago Ferreira t****a@g****m 12
Jan Eglinger j****r@u****e 6
Mark Hiner h****m@g****m 4
astuber a****r@g****m 2
Michael Doube m****l@d****t 1
Darío Hereñú m****a@g****m 1
Alison Walter a****2@w****u 1
Matthias Büchele b****s@g****m 1
Daniel Hornung d****g@d****e 1
Committer Domains (Top 20 + Academic)
wisc.edu: 2 ds.mpg.de: 1 doube.net: 1 uni-duesseldorf.de: 1 gmx.de: 1 rvc.ac.uk: 1

Issues and Pull Requests

Last synced: over 2 years ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
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Dependencies

.github/workflows/build-main.yml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • actions/setup-java v2 composite
.github/workflows/build-pr.yml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • actions/setup-java v2 composite
pom.xml maven
  • net.imagej:ij
  • net.imglib2:imglib2
  • org.joml:joml
  • junit:junit test