https://github.com/carv-ics-forth/slurmdatamover

A tool for managing data dependencies between jobs on a Workflow.

https://github.com/carv-ics-forth/slurmdatamover

Science Score: 13.0%

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Repository

A tool for managing data dependencies between jobs on a Workflow.

Basic Info
  • Host: GitHub
  • Owner: CARV-ICS-FORTH
  • License: bsd-3-clause
  • Language: C++
  • Default Branch: main
  • Size: 7.06 MB
Statistics
  • Stars: 1
  • Watchers: 5
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created almost 3 years ago · Last pushed almost 3 years ago
Metadata Files
Readme License

README.md

Slurm Data Mover (SDM)

A tool for managing data dependencies between jobs on a Workflow. This tool is responsible sending data on nodes that are allocated for executing a job via Slurm.

SDM aims to enable users to express data dependencies between phases of their workflows by identifying input and output files at the level of jobs. SDM offers users directives to implement data staging, i.e. orchestrate the necessary data transfers so that the jobs that are part of a workflow will find their required datasets in-place once they are scheduled for execution. In this manner, Slurm becomes more aware of workflows and is able to effectively utilize node-local storage resources. The expected benefits are derived from reduction of storage I/O load, and potential contention, to the underlying shared parallel filesystems, leading to improved job and workflow runtimes for jobs and workflows, while reducing potential performance interference.

Requirements

SDM requires the following packages:

  • cmake
  • make
  • gcc + g++

Optionaly:

  • ccmake (configuration ui)
  • libpoco
  • doxygen (documentation)

ArchLinux

sudo pacman -S cmake # poco doxygen

CentOS

sudo yum install cmake # poco-devel poco-foundation poco-net doxygen

Ubuntu

sudo apt-get install cmake # libpoco-dev doxygen

Usage

``` Produce file.txt: sdm --produce file.txt Consume file.txt: sdm --consume file.txt Start Node Server: sdm --serve

Options: -rhost:port --redis=host:port Redis socket address -b --bulk= Bulk Port -w --wui= Webui Port -c --consume= Consume input file -p --produce= Produce file -s --serve Start Node server -i --ip= Extra IP for this node -mname@path --mount=name@path Add mount to this node -n --nocache Drop FS caches before exec -e --exec= Command to execute - --daemon Run application as a daemon. - --umask= Set the daemon's umask (octal, e.g. 027). - --pidfile= Write the process ID of the application to given file. -h --help Print Help

You must pass at least one of Consume,Produce,Serve or Wui. ```

Owner

  • Name: Computer Architecture and VLSI Systems (CARV) Laboratory
  • Login: CARV-ICS-FORTH
  • Kind: organization
  • Location: Heraklion, Greece

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