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https://github.com/cbg-ethz/timeseriesnem

timeseriesNEM

https://github.com/cbg-ethz/timeseriesnem

Science Score: 13.0%

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    CITATION.cff file
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    Scientific vocabulary similarity
    Low similarity (4.9%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

timeseriesNEM

Basic Info
  • Host: GitHub
  • Owner: cbg-ethz
  • License: gpl-3.0
  • Language: R
  • Default Branch: master
  • Size: 49.8 KB
Statistics
  • Stars: 3
  • Watchers: 4
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created over 7 years ago · Last pushed over 7 years ago
Metadata Files
Readme License

README.md

timeseriesNEM

A method for mapping a non-interventional time series onto a static nested effects model, as inferred using the Bioconductor package nem.

Installing

Please make sure that you have the package devtools installed. Then run: devtools::install_github("cbg-ethz/timeseriesNEM")

Creating the vignette

In order to install the vignette, add the option build_vignettes = TRUE to the above command. If the vignette is still not created, the following command should do the trick: remotes::install_github("cbg-ethz/timeseriesNEM", build_opts = c("--no-resave-data", "--no-manual"), force = TRUE)

Owner

  • Name: Computational Biology Group (CBG)
  • Login: cbg-ethz
  • Kind: organization
  • Location: Basel, Switzerland

Beerenwinkel Lab at ETH Zurich

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Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
  • lpSolve * imports
  • nem * imports
  • knitr * suggests
  • rmarkdown * suggests