https://github.com/cboettig/earlywarning
:notebook: Methods for detecting early warning signals of critical transitions
Science Score: 23.0%
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Low similarity (9.3%) to scientific vocabulary
Repository
:notebook: Methods for detecting early warning signals of critical transitions
Basic Info
- Host: GitHub
- Owner: cboettig
- Language: R
- Default Branch: master
- Homepage: http://carlboettiger.info/projects/warning-signals.html
- Size: 10.9 MB
Statistics
- Stars: 10
- Watchers: 2
- Forks: 4
- Open Issues: 6
- Releases: 0
Metadata Files
README.md
Quantifying the Detection of Early Warning Signals
This package contains the source code, analysis, and history of my research published in the Proceedings of the Royal Society Interface, Limits to the Detection of Early Warning Signals for Critical Transitions with Alan Hastings, May 2012. A preprint under CC-by license is freely available from my website
- Author: Carl Boettiger
- License: CC0
- Project navigation
Installation
Software for the analysis is provided in R package format, see the functions in the R/ directory.
These functions can be made avialable by installing the package in R, along with its dependencies.
r
library(devtools)
install_github("earlywarning", "cboettig")
The individual-based simulations occassionally used in the analysis require a seperate package,
r
install_github("populationdynamics", "cboettig")
Use
Examples for executing the analysis provided in the manuscript are found in inst/examples. Additional examples and some further exploration are found in inst/examples/appendices.
Data
Data files for the analyses contained in the publication are included as R objects as part of the package, see the data directory.
Owner
- Name: Carl Boettiger
- Login: cboettig
- Kind: user
- Company: UC Berkeley
- Website: http://carlboettiger.info
- Repositories: 173
- Profile: https://github.com/cboettig
GitHub Events
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Last Year
Committers
Last synced: about 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Carl Boettiger | c****g@g****m | 101 |
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 18
- Total pull requests: 0
- Average time to close issues: about 1 month
- Average time to close pull requests: N/A
- Total issue authors: 3
- Total pull request authors: 0
- Average comments per issue: 0.72
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- cboettig (9)
- noamross (1)
- piklprado (1)
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Dependencies
- deSolve * imports
- methods * imports
- plyr * imports
- psych * imports
- reshape2 * imports
- Hmisc * suggests
- ggplot2 * suggests