https://github.com/cbrnr/sigviewer

A viewing application for biosignals

https://github.com/cbrnr/sigviewer

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    1 of 11 committers (9.1%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (12.6%) to scientific vocabulary

Keywords

eeg visualization
Last synced: 5 months ago · JSON representation

Repository

A viewing application for biosignals

Basic Info
  • Host: GitHub
  • Owner: cbrnr
  • License: gpl-3.0
  • Language: C++
  • Default Branch: main
  • Homepage:
  • Size: 8.42 MB
Statistics
  • Stars: 152
  • Watchers: 18
  • Forks: 40
  • Open Issues: 38
  • Releases: 4
Topics
eeg visualization
Created almost 12 years ago · Last pushed about 2 years ago
Metadata Files
Readme Changelog License

README.md

SigViewer

SigViewer is a viewing application for biosignals such as EEG or MEG time series. In addition to viewing raw data, SigViewer can also create, edit, and display event information (such as annotations or artifact selections).

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Screenshots

screenshot-1

Building SigViewer

SigViewer requires a standard-compliant C++11 build toolchain, for example recent versions of GCC or Clang. Other compilers such as MSVC might work, but are not tested. Furthermore, SigViewer depends on Qt. Current SigViewer builds use Qt 5.12 (previous or future versions are not guaranteed to work).

SigViewer also depends on libbiosig and libxdf. There are two options to get these external dependencies for your platform:

  1. Build these dependencies yourself (see separate descriptions below).
  2. Use our pre-built binaries. The corresponding archive contains binary versions of libbiosig and libxdf and must be extracted into SigViewer’s source folder (which we denote as $sigviewer).

Windows

Building SigViewer on Windows is currently not supported. We provide binaries created with the MXE cross compilation environment.

macOS

SigViewer requires Mac OS X (now renamed to macOS) 10.9 or later. First, install XCode from the App Store. Next, download and install Qt 5.12.3 for macOS or install Qt via Homebrew by running brew install qt in a terminal. Make sure that qmake is available on the path if you want to build SigViewer in a terminal. Alternatively, you can build SigViewer with Qt Creator (please refer to the description for building SigViewer on Windows).

  1. Download and unzip the SigViewer source.
  2. Provide all external dependencies:
    • Either download the external archive and extract it inside $sigviewer.
    • Or copy the necessary files from libbiosig and libxdf builds to the corresponding folders as detailed in the build descriptions for libbiosig and libxdf below.
  3. In a terminal, change to $sigviewer and run qmake.
  4. Run make (or if you want to use more cores to build in parallel, run make -j4 if you want to use four cores). The SigViewer binary is built in the bin/release folder.
  5. To create a stand-alone version of SigViewer, open a terminal, change into $sigviewer/bin/release and run macdeployqt sigviewer.app -dmg. This creates a disk image with the app, which can then be dragged to the Applications folder.

Linux

Install the GNU build toolchain and Qt 5 with your native package manager. You can either build on the command line or with Qt Creator (which you then need to install).

  1. Download and unzip the SigViewer source.
  2. Provide all external dependencies:
    • Either download the external archive and extract it inside $sigviewer.
    • Or copy the necessary files from libbiosig and libxdf builds to the corresponding folders as detailed in the build descriptions for libbiosig and libxdf below.
  3. In a terminal, change to $sigviewer and run qmake.
  4. Run make (or if you want to use more cores to build in parallel, run make -j 4 if you want to use four cores). The SigViewer binary is built in the bin/release folder.

Building external dependencies

Windows

Building libbiosig on Windows is currently not supported.

To build libxdf from source, follow these steps:

  1. Download and unzip the libxdf source (SigViewer 0.6.4 uses libxdf 0.99).
  2. On the command line, run qmake followed by mingw32-make (or build the project with Qt Creator) (instead of qmake, you can also run cmake .).
  3. Copy xdf.h into $sigviewer/external/include and libxdf.a to $sigviewer/external/lib.

macOS

To build libbiosig from source, follow these steps:

  1. Download and unzip BioSig for C/C++ into $libbiosig (SigViewer 0.6.4 uses libbiosig 1.9.4).
  2. Change line 156 of Makefile.in to CFLAGS += -mmacosx-version-min=10.9 (replace 10.13 with 10.9).
  3. In a terminal, change to $libbiosig and run ./configure.
  4. Run make.
  5. Copy biosig.h, biosig-dev.h, gdftime.h, and physicalunits.h to $sigviewer/external/include and libbiosig.a to $sigviewer/external/lib.

To build libxdf from source, follow these steps:

  1. Download and unzip the libxdf source to $libxdf (SigViewer 0.6.4 uses libxdf 0.99).
  2. In a terminal, change to $libxdf and run qmake followed by make (instead of qmake, you can also run cmake .).
  3. Copy xdf.h into $sigviewer/external/include and libxdf.a to $sigviewer/external/lib.

Linux

To build libbiosig from source, follow these steps:

  1. Download and unzip BioSig for C/C++ into $libbiosig (SigViewer 0.6.4 uses libbiosig 1.9.4).
  2. In a terminal, change to $libbiosig and run ./configure.
  3. Run make.
  4. Copy biosig.h, biosig-dev.h, gdftime.h, and physicalunits.h to $sigviewer/external/include and libbiosig.a to $sigviewer/external/lib.

To build libxdf from source, follow these steps:

  1. Download and unzip the libxdf source to $libxdf (SigViewer 0.6.4 uses libxdf 0.99).
  2. In a terminal, change to $libxdf and run qmake followed by make (instead of qmake, you can also run cmake .).
  3. Copy xdf.h into $sigviewer/external/include and libxdf.a to $sigviewer/external/lib.

Owner

  • Name: Clemens Brunner
  • Login: cbrnr
  • Kind: user
  • Location: Graz, Austria
  • Company: University of Graz

GitHub Events

Total
  • Issues event: 1
  • Watch event: 12
  • Issue comment event: 11
  • Pull request event: 1
  • Fork event: 2
Last Year
  • Issues event: 1
  • Watch event: 12
  • Issue comment event: 11
  • Pull request event: 1
  • Fork event: 2

Committers

Last synced: 7 months ago

All Time
  • Total Commits: 713
  • Total Committers: 11
  • Avg Commits per committer: 64.818
  • Development Distribution Score (DDS): 0.363
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Christoph Eibel c****l@t****t 454
Clemens Brunner c****r@g****m 93
Clemens Brunner c****r@t****t 62
Alois Schloegl a****l@t****t 42
Yida Lin y****n@o****m 39
Thomas Brunner t****r@t****t 9
Alois SCHLOEGL a****l@i****t 8
Aleksei Nikiforov 4****t 3
freiform s****r@g****m 1
Stefan Repplinger s****r@p****t 1
Kevin Smathers k****s@h****m 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 7 months ago

All Time
  • Total issues: 77
  • Total pull requests: 83
  • Average time to close issues: about 1 month
  • Average time to close pull requests: 8 days
  • Total issue authors: 8
  • Total pull request authors: 3
  • Average comments per issue: 3.42
  • Average comments per pull request: 6.24
  • Merged pull requests: 61
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 2
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 2
  • Pull request authors: 1
  • Average comments per issue: 5.5
  • Average comments per pull request: 1.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • cbrnr (21)
  • Yida-Lin (20)
  • luckyTomas (3)
  • pparzer (2)
  • tempestz (1)
  • Keiishkii (1)
  • saramoghadam (1)
  • sappelhoff (1)
  • schloegl (1)
  • brylie (1)
Pull Request Authors
  • Yida-Lin (46)
  • cbrnr (7)
  • stfnrpplngr (1)
Top Labels
Issue Labels
user interface (8) enhancement (7) bug (3) documentation (1)
Pull Request Labels