Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/cdcgov/cran-packages

Searches CRAN for packages that might have been authored or funded by CDC

https://github.com/cdcgov/cran-packages

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.3%) to scientific vocabulary

Keywords

cran open-source packages r
Last synced: 5 months ago · JSON representation

Repository

Searches CRAN for packages that might have been authored or funded by CDC

Basic Info
  • Host: GitHub
  • Owner: CDCgov
  • License: other
  • Language: R
  • Default Branch: main
  • Homepage:
  • Size: 83 KB
Statistics
  • Stars: 2
  • Watchers: 1
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Topics
cran open-source packages r
Created 8 months ago · Last pushed 6 months ago
Metadata Files
Readme License

README.Rmd 

---
output: github_document
---




```{r}
#| echo: false
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)
```




# cranpackages: Check for CDC contributted R packages in CRAN



[![R-CMD-check](https://github.com/CDCgov/cran-packages/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/CDCgov/cran-packages/actions/workflows/R-CMD-check.yaml)
[![Codecov test coverage](https://codecov.io/gh/CDCgov/cran-packages/graph/badge.svg)](https://app.codecov.io/gh/CDCgov/cran-packages)



## Overview

Checks [CRAN](https://cran.r-project.org/) information for packages authored or
maintained by CDC employees, or those that declare CDC funding.
Looks in the undocumented file `packages.rds` as suggested by
[Jeroen Ooms](https://github.com/jeroen) in
in [this `stackoverflow` answer](https://stackoverflow.com/a/8830439).
While there is no guarantee that the file will continue to be available,
it exists _at least_ since Jan 2012, when that answer was provided.

Looks for `CDC`, `cdc.gov`, and `Disease Control` in the author and maintainer
fields for all packages listed in CRAN.
It does not look for archived packages.


## Usage

Unless you expect or know the file to have moved locations, the default `url`
should be fine.
Unless you want to try different search patterns, the default `regex` should be
fine.


This table was last updated on `r format(Sys.time(), "%Y-%m-%d at %H:%M %Z")`.

```{r eval=FALSE}
remotes::install_github("CDCgov/cran-packages")

library(package = "cranpackages")

get_cdc_authored()
```


```{r eval=TRUE, echo=FALSE, message=FALSE}
cdc_packages <- cranpackages::get_cdc_authored()

cdc_packages$Package <- paste0(
  "[", cdc_packages$Package, "](", cdc_packages$CRAN_URL, ")"
)

cdc_packages$CRAN_URL <- NULL

knitr::kable(cdc_packages)
```




```{r child=c("DISCLAIMER.md", "LICENSE.md")}

```

Owner

  • Name: Centers for Disease Control and Prevention
  • Login: CDCgov
  • Kind: organization
  • Email: data@cdc.gov
  • Location: Atlanta, GA

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

GitHub Events

Total
  • Issues event: 3
  • Watch event: 1
  • Push event: 16
  • Public event: 1
  • Fork event: 1
  • Create event: 1
Last Year
  • Issues event: 3
  • Watch event: 1
  • Push event: 16
  • Public event: 1
  • Fork event: 1
  • Create event: 1

Dependencies

.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v4 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v4 composite
  • actions/upload-artifact v4 composite
  • codecov/codecov-action v5 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • R >= 4.1.0 depends
  • stats * imports
  • utils * imports
  • testthat >= 3.0.0 suggests
.github/workflows/render-rmarkdown.yaml actions
  • actions/checkout v4 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite