https://github.com/cdcgov/vapintr
Science Score: 13.0%
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○CITATION.cff file
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○.zenodo.json file
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○Scientific vocabulary similarity
Low similarity (14.9%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: CDCgov
- License: apache-2.0
- Language: R
- Default Branch: main
- Size: 1.57 MB
Statistics
- Stars: 2
- Watchers: 3
- Forks: 3
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
vapintr
About
This package was developed to enable Monte Carlo simulation of the Johnson & Ettinger groundwater vapor intrusion model tool version 6 as developed by EPA (EPA 2020).
The motivation was that to analyze multiple chemicals across multiple buildings, with uncertain parameters, a Monte Carlo simulation would allow for the effects of multiple uncertain parameters to be considered simultaneously in probabilistic estimates of exposure.
The vapintr package was built step wise from the original Johnson and Ettinger Model Spreadsheet Tool, Version 6.0 (XLS) set to the groundwater source catagory. Note, vapintr does not directly support soil gas source measurements. We anticipate a future enhancement will add this feature.
Introduction to vapintr
Design philosophy
Where possible were initial coded from the official EPA J&E model
spreadsheet tool. Modification were needed to accommodate the mc2d
package in some functions. Functions are designed to operate independent
of each other. This allows the maximum amount of granularity in any
simulation.
Future improvements
TBD.
Background and Motivation
The purpose of this vignette is to illustrate the use of the vapintr package with both a deterministic variables and with a Monte Carlo simulation. For the deterministic analysis, both central tendency estimates (CTE) and reasonable maximum estimate (RME) inputs are provided.
Inputs are provided in an example Microsoft Excel workbook. We will combine the results of the two analysis for comparison purposes.
Installation
To install vapintr:
r
devtools::install_git("https://github.com/CDCgov/vapintr", ref = "main", build_vignettes = TRUE, build_manual = TRUE)
Public Domain Standard Notice
This repository constitutes a work of the United States Government and is not subject to domestic copyright protection under 17 USC § 105. This repository is in the public domain within the United States, and copyright and related rights in the work worldwide are waived through the CC0 1.0 Universal public domain dedication. All contributions to this repository will be released under the CC0 dedication. By submitting a pull request you are agreeing to comply with this waiver of copyright interest.
License Standard Notice
The repository utilizes code licensed under the terms of the Apache Software License and therefore is licensed under ASL v2 or later.
This source code in this repository is free: you can redistribute it and/or modify it under the terms of the Apache Software License version 2, or (at your option) any later version.
This source code in this repository is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache Software License for more details.
You should have received a copy of the Apache Software License along with this program. If not, see http://www.apache.org/licenses/LICENSE-2.0.html
The source code forked from other open source projects will inherit its license.
Privacy Standard Notice
This repository contains only non-sensitive, publicly available data and information. All material and community participation is covered by the Disclaimer and Code of Conduct. For more information about CDC’s privacy policy, please visit http://www.cdc.gov/other/privacy.html.
Contributing Standard Notice
Anyone is encouraged to contribute to the repository by forking and submitting a pull request. (If you are new to GitHub, you might start with a basic tutorial.) By contributing to this project, you grant a world-wide, royalty-free, perpetual, irrevocable, non-exclusive, transferable license to all users under the terms of the Apache Software License v2 or later.
All comments, messages, pull requests, and other submissions received through CDC including this GitHub page may be subject to applicable federal law, including but not limited to the Federal Records Act, and may be archived. Learn more at http://www.cdc.gov/other/privacy.html.
Records Management Standard Notice
This repository is not a source of government records, but is a copy to increase collaboration and collaborative potential. All government records will be published through the CDC web site.
Owner
- Name: Centers for Disease Control and Prevention
- Login: CDCgov
- Kind: organization
- Email: data@cdc.gov
- Location: Atlanta, GA
- Website: http://open.cdc.gov/
- Twitter: CDCgov
- Repositories: 114
- Profile: https://github.com/CDCgov
CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
GitHub Events
Total
- Watch event: 1
- Push event: 3
- Fork event: 4
Last Year
- Watch event: 1
- Push event: 3
- Fork event: 4
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
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Dependencies
- actions/checkout v4 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- R >= 2.10 depends
- DT * imports
- config >= 0.3.1 imports
- cowplot * imports
- dplyr * imports
- fitdistrplus * imports
- ggpattern * imports
- ggplot2 * imports
- golem >= 0.4.1 imports
- grDevices * imports
- lubridate * imports
- magrittr * imports
- mc2d >= 0.1.18 imports
- methods * imports
- openxlsx * imports
- rlang * imports
- scales * imports
- sf * imports
- shiny >= 1.7.4 imports
- shinyalert * imports
- shinyjs * imports
- stats * imports
- stringr * imports
- writexl * imports
- zip * imports
- knitr * suggests
- readxl * suggests
- rmarkdown * suggests
- testthat * suggests