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Open Source Science

https://github.com/cdcgov/nedss-dataingestionsandbox

Sandbox to test concepts and experiments without impacting the NEDSS-DataIngestion

https://github.com/cdcgov/nedss-dataingestionsandbox

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (0.4%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Sandbox to test concepts and experiments without impacting the NEDSS-DataIngestion

Basic Info
  • Host: GitHub
  • Owner: CDCgov
  • Language: Python
  • Default Branch: main
  • Size: 125 MB
Statistics
  • Stars: 1
  • Watchers: 4
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Created over 3 years ago · Last pushed 11 months ago
Metadata Files
Readme

README.md

NEDSS-DataIngestionSandbox

Sandbox to test concepts and experiments without impacting the NEDSS-DataIngestion

Owner

  • Name: Centers for Disease Control and Prevention
  • Login: CDCgov
  • Kind: organization
  • Email: data@cdc.gov
  • Location: Atlanta, GA

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

GitHub Events

Total
  • Delete event: 3
  • Member event: 1
  • Push event: 16
  • Pull request event: 6
  • Fork event: 3
  • Create event: 4
Last Year
  • Delete event: 3
  • Member event: 1
  • Push event: 16
  • Pull request event: 6
  • Fork event: 3
  • Create event: 4

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 0
  • Total pull requests: 27
  • Average time to close issues: N/A
  • Average time to close pull requests: about 5 hours
  • Total issue authors: 0
  • Total pull request authors: 6
  • Average comments per issue: 0
  • Average comments per pull request: 0.04
  • Merged pull requests: 25
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 5
  • Average time to close issues: N/A
  • Average time to close pull requests: about 23 hours
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • sralla-eq (15)
  • snehaasjournal (14)
  • raddanki-eq (6)
  • rshanmugam-enquizit (3)
  • ssathiah (2)
  • ndduc01 (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

nbsadapter/Dockerfile docker
  • maven 3.6.0-jdk-11-slim build
  • openjdk 11-jre-slim build
phinadapter/Dockerfile docker
  • maven 3.6.0-jdk-11-slim build
  • openjdk 11-jre-slim build
nbsadapter/build.gradle maven
  • org.projectlombok:lombok 1.18.24 compileOnly
  • ca.uhn.hapi:hapi-base 2.2-beta1 implementation
  • ca.uhn.hapi:hapi-structures-v26 2.2-beta1 implementation
  • com.google.code.gson:gson 2.8.9 implementation
  • io.springfox:springfox-swagger-ui 2.9.2 implementation
  • io.springfox:springfox-swagger2 2.9.2 implementation
  • junit:junit 4.13.2 implementation
  • org.apache.camel.springboot:camel-file-starter 3.0.0 implementation
  • org.apache.camel:camel-core 2.22.2 implementation
  • org.apache.camel:camel-core 3.0.0 implementation
  • org.apache.camel:camel-hl7-starter 3.0.0-RC3 implementation
  • org.apache.camel:camel-kafka 3.0.0 implementation
  • org.apache.httpcomponents:httpclient 4.5.11 implementation
  • org.mongodb:mongo-java-driver 3.12.11 implementation
  • org.projectlombok:lombok 1.18.22 implementation
  • org.sonatype.sisu:sisu-inject-bean 1.4.2 implementation
  • org.springframework.boot:spring-boot-starter-data-jpa 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-test 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-web 2.5.8 implementation
  • org.springframework.data:spring-data-mongodb 3.3.1 implementation
  • org.springframework:spring-test 5.3.14 implementation
  • com.microsoft.sqlserver:mssql-jdbc 9.2.1.jre8 runtimeOnly
  • javax.xml.bind:jaxb-api 2.1 runtimeOnly
nbsadapter/pom.xml maven
  • ca.uhn.hapi.fhir:org.hl7.fhir.r4 5.6.881
  • ca.uhn.hapi:hapi-base 2.2-beta1
  • ca.uhn.hapi:hapi-structures-v26 2.2-beta1
  • com.google.code.gson:gson 2.8.9
  • com.microsoft.sqlserver:mssql-jdbc
  • io.springfox:springfox-swagger-ui 2.9.2
  • io.springfox:springfox-swagger2 2.9.2
  • org.apache.camel.springboot:camel-file-starter 3.0.0
  • org.apache.camel:camel-core 3.0.0
  • org.apache.camel:camel-hl7-starter 3.0.0-RC3
  • org.apache.camel:camel-kafka 3.0.0
  • org.apache.httpcomponents:httpclient 4.5.11
  • org.mongodb:mongo-java-driver 3.12.11
  • org.projectlombok:lombok
  • org.sonatype.sisu:sisu-inject-bean 1.4.2
  • org.springframework.boot:spring-boot-starter-data-jpa
  • org.springframework.boot:spring-boot-starter-web
  • org.springframework.data:spring-data-mongodb 3.3.1
  • junit:junit test
  • org.springframework.boot:spring-boot-starter-test test
  • org.springframework:spring-test test
phinadapter/build.gradle maven
  • org.projectlombok:lombok 1.18.24 compileOnly
  • ca.uhn.hapi:hapi-base 2.2-beta1 implementation
  • ca.uhn.hapi:hapi-structures-v26 2.2-beta1 implementation
  • com.google.code.gson:gson 2.8.9 implementation
  • io.springfox:springfox-swagger-ui 2.9.2 implementation
  • io.springfox:springfox-swagger2 2.9.2 implementation
  • junit:junit 4.13.2 implementation
  • org.apache.camel.springboot:camel-file-starter 3.0.0 implementation
  • org.apache.camel:camel-core 2.22.2 implementation
  • org.apache.camel:camel-core 3.0.0 implementation
  • org.apache.camel:camel-hl7-starter 3.0.0-RC3 implementation
  • org.apache.camel:camel-kafka 3.0.0 implementation
  • org.apache.httpcomponents:httpclient 4.5.11 implementation
  • org.mongodb:mongo-java-driver 3.12.11 implementation
  • org.projectlombok:lombok 1.18.22 implementation
  • org.sonatype.sisu:sisu-inject-bean 1.4.2 implementation
  • org.springframework.boot:spring-boot-starter-data-jpa 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-test 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-web 2.5.8 implementation
  • org.springframework.data:spring-data-mongodb 3.3.1 implementation
  • org.springframework:spring-test 5.3.14 implementation
  • com.microsoft.sqlserver:mssql-jdbc 9.2.1.jre8 runtimeOnly
  • javax.xml.bind:jaxb-api 2.1 runtimeOnly
phinadapter/pom.xml maven
  • com.google.code.gson:gson 2.8.9
  • com.microsoft.sqlserver:mssql-jdbc
  • io.springfox:springfox-swagger-ui 2.9.2
  • io.springfox:springfox-swagger2 2.9.2
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  • org.apache.httpcomponents:httpclient 4.5.11
  • org.jasypt:jasypt 1.9.3
  • org.json:json 20220924
  • org.projectlombok:lombok
  • org.sonatype.sisu:sisu-inject-bean 1.4.2
  • org.springframework.boot:spring-boot-starter-data-jpa
  • org.springframework.boot:spring-boot-starter-web
  • junit:junit test
  • org.springframework.boot:spring-boot-starter-test test
  • org.springframework:spring-test test
authtester/Dockerfile docker
  • amazoncorretto 17 build
jwtgenerator/Dockerfile docker
  • maven 3.6.0-jdk-11-slim build
  • openjdk 11-jre-slim build
nbsauthenticator/Dockerfile docker
  • amazoncorretto 17 build
authtester/build.gradle maven
  • javax.servlet:javax.servlet-api 3.0.1 compileOnly
  • org.projectlombok:lombok 1.18.26 compileOnly
  • io.springfox:springfox-swagger-ui 2.9.2 implementation
  • io.springfox:springfox-swagger2 2.9.2 implementation
  • jakarta.persistence:jakarta.persistence-api 3.1.0 implementation
  • junit:junit 4.13.2 implementation
  • org.apache.httpcomponents:httpclient 4.5.11 implementation
  • org.projectlombok:lombok 1.18.22 implementation
  • org.sonatype.sisu:sisu-inject-bean 2.6.0 implementation
  • org.springframework.boot:spring-boot-starter-test 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-web 2.5.8 implementation
  • org.springframework:spring-test 6.0.6 implementation
  • com.microsoft.sqlserver:mssql-jdbc 12.2.0.jre8 runtimeOnly
cli/build.gradle maven
  • info.picocli:picocli 4.7.4 implementation
  • org.apache.httpcomponents:httpclient 4.5.14 implementation
  • org.junit.jupiter:junit-jupiter-api 5.9.2 testImplementation
  • org.mockito:mockito-core 5.2.0 testImplementation
  • org.junit.jupiter:junit-jupiter-engine 5.9.2 testRuntimeOnly
duplicatesAnalyzer/pom.xml maven
  • io.springfox:springfox-swagger-ui 2.9.2
  • io.springfox:springfox-swagger2 2.9.2
  • org.apache.camel.springboot:camel-file-starter 3.0.0
  • org.apache.camel:camel-core 3.0.0
  • org.apache.camel:camel-csv 3.0.0
  • org.apache.commons:commons-lang3 3.12.0
  • org.apache.httpcomponents:httpclient 4.5.11
  • org.projectlombok:lombok
  • org.springframework.boot:spring-boot-starter-web
  • org.springframework.boot:spring-boot-starter-test test
jwtgenerator/build.gradle maven
  • org.projectlombok:lombok 1.18.24 compileOnly
  • ca.uhn.hapi:hapi-base 2.2-beta1 implementation
  • ca.uhn.hapi:hapi-structures-v26 2.2-beta1 implementation
  • com.google.code.gson:gson 2.8.9 implementation
  • io.jsonwebtoken:jjwt-api 0.11.1 implementation
  • io.springfox:springfox-swagger-ui 2.9.2 implementation
  • io.springfox:springfox-swagger2 2.9.2 implementation
  • junit:junit 4.13.2 implementation
  • org.apache.camel.springboot:camel-file-starter 3.0.0 implementation
  • org.apache.camel:camel-core 2.22.2 implementation
  • org.apache.camel:camel-core 3.0.0 implementation
  • org.apache.camel:camel-hl7-starter 3.0.0-RC3 implementation
  • org.apache.camel:camel-kafka 3.0.0 implementation
  • org.apache.httpcomponents:httpclient 4.5.11 implementation
  • org.jasypt:jasypt 1.9.3 implementation
  • org.mongodb:mongo-java-driver 3.12.11 implementation
  • org.projectlombok:lombok 1.18.22 implementation
  • org.sonatype.sisu:sisu-inject-bean 1.4.2 implementation
  • org.springframework.boot:spring-boot-starter-data-jpa 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-test 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-web 2.5.8 implementation
  • org.springframework.data:spring-data-mongodb 3.3.1 implementation
  • org.springframework:spring-test 5.3.14 implementation
  • com.microsoft.sqlserver:mssql-jdbc 9.2.1.jre8 runtimeOnly
  • javax.xml.bind:jaxb-api 2.1 runtimeOnly
nbsauthenticator/build.gradle maven
  • javax.servlet:javax.servlet-api 3.0.1 compileOnly
  • org.projectlombok:lombok 1.18.26 compileOnly
  • com.google.code.gson:gson 2.8.9 implementation
  • io.jsonwebtoken:jjwt-api 0.11.5 implementation
  • io.jsonwebtoken:jjwt-gson 0.11.5 implementation
  • io.jsonwebtoken:jjwt-impl 0.11.5 implementation
  • io.springfox:springfox-swagger-ui 2.9.2 implementation
  • io.springfox:springfox-swagger2 2.9.2 implementation
  • jakarta.persistence:jakarta.persistence-api 3.1.0 implementation
  • junit:junit 4.13.2 implementation
  • org.apache.httpcomponents:httpclient 4.5.11 implementation
  • org.jasypt:jasypt 1.9.3 implementation
  • org.projectlombok:lombok 1.18.22 implementation
  • org.sonatype.sisu:sisu-inject-bean 2.6.0 implementation
  • org.springframework.boot:spring-boot-starter-data-jpa 3.0.4 implementation
  • org.springframework.boot:spring-boot-starter-test 2.5.8 implementation
  • org.springframework.boot:spring-boot-starter-web 2.5.8 implementation
  • org.springframework:spring-test 6.0.6 implementation
  • com.microsoft.sqlserver:mssql-jdbc 12.2.0.jre8 runtimeOnly
prototype-hl7-parser/build.gradle maven
  • ca.uhn.hapi.fhir:hapi-fhir-base 6.4.2 implementation
  • ca.uhn.hapi:hapi-base 2.3 implementation
  • ca.uhn.hapi:hapi-structures-v251 2.3 implementation
  • io.github.linuxforhealth:hl7v2-fhir-converter 1.0.10 implementation
  • org.jdom:jdom2 2.0.6.1 implementation
  • org.springframework.boot:spring-boot-starter * implementation
  • org.springframework.boot:spring-boot-starter-web * implementation
  • org.springframework.boot:spring-boot-starter-test * testImplementation
.github/workflows/codeql.yml actions
  • actions/checkout v4 composite
  • github/codeql-action/analyze v3 composite
  • github/codeql-action/autobuild v3 composite
  • github/codeql-action/init v3 composite
.github/workflows/sonarqube.yml actions
  • SonarSource/sonarqube-scan-action 7295e71c9583053f5bf40e9d4068a0c974603ec8 composite
hl7generator/SyntheaxGenerator/myenv/lib/python3.9/site-packages/numpy/_core/tests/examples/cython/setup.py pypi
hl7generator/SyntheaxGenerator/myenv/lib/python3.9/site-packages/numpy/_core/tests/examples/limited_api/setup.py pypi
hl7generator/SyntheaxGenerator/myenv/lib/python3.9/site-packages/pandas/pyproject.toml pypi
  • numpy >=1.22.4; python_version<'3.11'
  • numpy >=1.23.2; python_version=='3.11'
  • numpy >=1.26.0; python_version>='3.12'
  • python-dateutil >=2.8.2
  • pytz >=2020.1
  • tzdata >=2022.7
hl7generator/SyntheaxGenerator/myenv/lib/python3.9/site-packages/pkg_resources/tests/data/my-test-package-source/setup.py pypi
hl7generator/SyntheaxGenerator/requirements.txt pypi
  • aiohttp *
  • asyncio *
  • boto3 *
  • botocore *
  • datetime *
  • faker *
  • jsonschema *
  • pandas *
  • pyodbc *
  • requests *
  • sqlalchemy *
hl7generator/local/myenv/lib/python3.9/site-packages/numpy/_core/tests/examples/cython/setup.py pypi
hl7generator/local/myenv/lib/python3.9/site-packages/numpy/_core/tests/examples/limited_api/setup.py pypi
hl7generator/local/myenv/lib/python3.9/site-packages/pandas/pyproject.toml pypi
  • numpy >=1.22.4; python_version<'3.11'
  • numpy >=1.23.2; python_version=='3.11'
  • numpy >=1.26.0; python_version>='3.12'
  • python-dateutil >=2.8.2
  • pytz >=2020.1
  • tzdata >=2022.7
hl7generator/local/myenv/lib/python3.9/site-packages/pkg_resources/tests/data/my-test-package-source/setup.py pypi
hl7generator/local/requirements.txt pypi
  • aiohttp *
  • asyncio *
  • boto3 *
  • botocore *
  • datetime *
  • faker *
  • jsonschema *
  • pandas *
  • pyodbc *
  • requests *
  • sqlalchemy *
hl7generator/s3andDI/numpy/_typing/setup.py pypi
hl7generator/s3andDI/numpy/array_api/setup.py pypi
hl7generator/s3andDI/numpy/compat/setup.py pypi
hl7generator/s3andDI/numpy/core/tests/examples/cython/setup.py pypi
hl7generator/s3andDI/numpy/core/tests/examples/limited_api/setup.py pypi
hl7generator/s3andDI/numpy/distutils/setup.py pypi
hl7generator/s3andDI/numpy/f2py/setup.py pypi
hl7generator/s3andDI/numpy/lib/setup.py pypi
hl7generator/s3andDI/numpy/ma/setup.py pypi
hl7generator/s3andDI/numpy/matrixlib/setup.py pypi
hl7generator/s3andDI/numpy/polynomial/setup.py pypi
hl7generator/s3andDI/numpy/testing/setup.py pypi
hl7generator/s3andDI/numpy/typing/setup.py pypi
hl7generator/s3andDI/pandas/pyproject.toml pypi
  • numpy >=1.22.4,<2; python_version<'3.11'
  • numpy >=1.23.2,<2; python_version=='3.11'
  • numpy >=1.26.0,<2; python_version>='3.12'
  • python-dateutil >=2.8.2
  • pytz >=2020.1
  • tzdata >=2022.7
hl7generator/s3andDI/requirements.txt pypi
  • aiohttp *
  • asyncio *
  • boto3 *
  • botocore *
  • datetime *
  • faker *
  • jsonschema *
  • pandas *
  • pyodbc *
  • requests *
  • sqlalchemy *