https://github.com/certara/nlme-performance-demo
Repository containing scripts presented at public conferences for NLME performance testing and benchmarking.
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Academic email domains
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○Scientific vocabulary similarity
Low similarity (4.4%) to scientific vocabulary
Repository
Repository containing scripts presented at public conferences for NLME performance testing and benchmarking.
Basic Info
- Host: GitHub
- Owner: certara
- Language: AMPL
- Default Branch: main
- Size: 34.3 MB
Statistics
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
nlme-performance-demo
Repository containing scripts presented at public conferences for NLME performance testing and benchmarking. The public benchmarks are limited to the finite difference implementation of NLME.
A NONMEM and NLME license are required. It is assumed the nmfe75.bat is in the system path.
A free 30 day NLME license is available, contact support\@certara.com
To execute the ODE-Michaelis-Menten benchmarks
clone repo into a folder
reboot the computer if desired for a consistent environment
Open R Studio
Navigate to the sub folder "ODE-Michaelis-Menten" in the installed folder
Execute the nlme benchmark (RunNLME.R)
reboot the computer if desired for a consistent environment
Navigate back to the sub folder "ODE-Michaelis-Menten" in the installed folder
Execute the NONMEM benchmark (RunNONMEM.R)
Navigate back to the sub folder "ODE-Michaelis-Menten" in the installed folder
Execute combine.R for plots and statistics
Owner
- Name: Certara USA, Inc.
- Login: certara
- Kind: organization
- Email: github-admins@certara.com
- Website: https://www.certara.com/
- Repositories: 8
- Profile: https://github.com/certara