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https://github.com/cgevans/stochastic-greedy-nucleation

https://github.com/cgevans/stochastic-greedy-nucleation

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
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    .zenodo.json file
  • ✓
    DOI references
    Found 7 DOI reference(s) in README
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    Academic publication links
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    Institutional organization owner
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    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.3%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: cgevans
  • Language: Rust
  • Default Branch: main
  • Size: 48.8 KB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created about 1 year ago · Last pushed about 1 year ago
Metadata Files
Readme

README.md

This is an implementation of the stochastic greedy model of nucleation, and related models, originally described in Evans et al, 2024 [^1]. The repository includes both the original Julia code, and a Rust reimplementation that can also be used as a Python module. Much of the Rust code was generated with heavy use of LLM-based translation, and needs review.

[^1]: C. G. Evans, J. O’Brien, E. Winfree, and A. Murugan, “Pattern recognition in the nucleation kinetics of non-equilibrium self-assembly”, Nature, vol. 625, no. 7995, pp. 500–507, Jan. 2024. doi:10.1038/s41586-023-06890-z

Owner

  • Name: Constantine Evans
  • Login: cgevans
  • Kind: user

GitHub Events

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Last synced: 12 months ago

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Dependencies

Cargo.toml cargo
  • criterion 0.5 development
  • approx 0.5.1
  • itertools 0.14.0
  • logaddexp 0.1.3
  • ndarray 0.16
  • ndarray-stats 0.6.0
  • num-traits 0.2.19
  • numpy 0.23
  • pyo3 0.23
  • rand 0.8
pyproject.toml pypi
  • numpy >=1.20.0